Escherichia coli UPEC-245U/190328 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli UPEC-245U/190328 RM systems
Ref: Velez-Sanchez,D. et al. unpublished
REBASE ref # 32738
| Sequence length: | GenBank #: | |
| Chromosome: | 5,016,451 bp | CP049845 |
| plasmid pEcoUTI1d: | 90,408 bp | CP049847 |
| plasmid pEcoUTI1d: | 109,478 bp | CP049846 |
| plasmid pEcoUTI1d: | 68,488 bp | CP049848 |
REBASE acronym: Eco190328
Org_num: 50757
All begin G9W35_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1210 | LexA family transcriptional regulator | |||
| 1215 | M | M.SflFF35ORF16050P (100% identity) | GATC | M.Eco190328ORF1215P |
| 1220 | PerC family transcriptional regulator | |||
| 1835 | sigma 54-interacting transcriptional regulator | |||
| 1840 | R | EcoE1441ORF4219P (100% identity) | Eco190328ORF1840P | |
| 1845 | IS3 family transposase | |||
| 6735 | cell division protein DamX | |||
| 6740 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco190328DamP |
| 6745 | ribulose-phosphate 3-epimerase | |||
| 7265 | DUF2556 family protein | |||
| 7270 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco190328ORF7270P |
| 7275 | DNA-binding transcriptional regulator Fis | |||
| 14325 | phosphohydrolase | |||
| 14330 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.Eco190328DcmP |
| 14335 | V | V.SflFF64DcmP (100% identity) | V.Eco190328DcmP | |
| 14340 | drug/metabolite exporter YedA | |||
| 20440 | replication endonuclease | |||
| 20445 | M | M.SdyFF10ORF5495P (100% identity) | GATC | M.Eco190328ORF20445P |
| 20450 | TraR/DksA family transcriptional regulator | |||
| plasmid pEcoUTI1d | ||||
| 25415 | SPFH/Band 7/PHB domain protein | |||
| 25430 | M | M.EfeC13ORF24760P (100% identity) | M.Eco190328ORF25430P | |
| 25435 | recombination-associated protein RdgC | |||
| plasmid pEcoUTI1d | ||||
| 24395 | 102 aa hypothetical protein | |||
| 24400 | M | M.Sso866ORF27155P (100% identity) | M.Eco190328ORF24400P | |
| 24405 | 73 aa hypothetical protein | |||
| plasmid pEcoUTI1d | ||||
| 25550 | 103 aa hypothetical protein | |||
| 25555 | M | M.Sfl7ORF23565P (100% identity) | M.Eco190328ORF25555P | |
| 25560 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1545 | 100 aa hypothetical protein | |||
| 1550 | R | SflN116ORF19490P (100% identity) | Eco190328ORF1555P | |
| 1555 | M | M.EcoC0350ORF21250P (100% identity) | M1.Eco190328ORF1555P | |
| 1560 | M | M.SflN116ORF19490P (41% identity) | M2.Eco190328ORF1555P | |
| 1565 | ATP-dependent helicase | |||