Neisseria gonorrhoeae CT213 |
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Putative Neisseria gonorrhoeae CT213 RM systems
Ref: Nokchan,N. et al. unpublished
REBASE ref # 32839
Complete sequence: 2,168,255 bp
GenBank #: CP048929
REBASE acronym: NgoCT213
Org_num: 51155
All begin G5S46_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2055 | ADP-glyceromanno-heptose 6-epimerase | |||
| 2060 | M | M.NgoPID18ORF652P (99% identity) | M.NgoCT213ORF2060P | |
| 2065 | DNA damage-inducible protein D | |||
| 2070 | S | S1.NgoWOORF429P (100% identity) | GCANNNNNNNNTGC | S1.NgoCT213ORF2060P |
| 2075 | S | S2.NgoWSII (100% identity) | GCANNNNNNNNTGC | S2.NgoCT213ORF2060P |
| 2080 | R | NgoWSIIP (100% identity) | NgoCT213ORF2060P | |
| 2085 | ATP-dependent Clp protease ATP-binding subunit | |||
| 3480 | replication-associated recombination protein A | |||
| 3485 | R | Ngo690ORF3555P (99% identity) | GAGNNNNNTAC | NgoCT213ORF3510P |
| 3490 | hydroxyacid dehydrogenase | |||
| 3495 | S | S.NgoWLI (100% identity) | GAGNNNNNTAC | S.NgoCT213ORF3510P |
| 3500 | 186 aa hypothetical protein | |||
| 3505 | 280 aa hypothetical protein | |||
| 3510 | M | M.NgoNG250ORF4770P (100% identity) | GAGNNNNNTAC | M.NgoCT213ORF3510P |
| 3515 | ABC transporter | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 30 | leucine--tRNA ligase | |||
| 35 | R | Ngos1291ORF5750P (100% identity) | GATC | NgoCT213ORF35P |
| 40 | DNA adenine methylase | |||
| 35 | restriction endonuclease | |||
| ??? | M | M.Ngo4618ORF1990P (100% identity) | M.NgoCT213ORF40P | |
| 55 | 184 aa hypothetical protein | |||
| 1530 | phenylalanine--tRNA ligase subunit alpha | |||
| 1535 | V | V.NgoWSORF391P (100% identity) | V.NgoCT213ORF1540P | |
| ??? | M | M.NgoWSORF391P (100% identity) | M.NgoCT213ORF1540P | |
| 1550 | R | Npo18661ORFHP (100% identity) | NgoCT213ORF1540P | |
| 1555 | phenylalanine--tRNA ligase subunit beta | |||
| 1820 | IS1595 family transposase | |||
| 1825 | RM | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | NgoCT213ORF1825P |
| 1830 | S | S.NgoWSORF450P (100% identity) | GACNNNNNTGA | S.NgoCT213ORF1825P |
| 1835 | 140 aa hypothetical protein | |||
| 1855 | uroporphyrinogen decarboxylase | |||
| 1860 | H | H.NgoNG250ORF1950P (100% identity) | H.NgoCT213ORF1870P | |
| 1865 | R | Ngos1291ORF7560P (100% identity) | GCSGC | NgoCT213ORF1870P |
| 1870 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.NgoCT213ORF1870P |
| 1875 | DNA repair protein RadA | |||
| 3375 | 3-isopropylmalate dehydrogenase | |||
| 3380 | R | Ngos1291ORF9120P (100% identity) | GGNNCC | NgoCT213ORF3385P |
| 3385 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.NgoCT213ORF3385P |
| 3390 | 3-isopropylmalate dehydratase small subunit | |||
| 4315 | anthranilate synthase component I | |||
| 4320 | M | M.NgoWLORF1156P (100% identity) | GCCGGC | M.NgoCT213ORF4320P |
| 4325 | R | NgoFQ01ORF4235P (100% identity) | GCCGGC | NgoCT213ORF4320P |
| 4330 | 5-(carboxyamino)imidazole ribonucleotide | |||
| 5650 | replication initiation factor | |||
| 5655 | V | V.Ngos1291ORF65P (100% identity) | V.NgoCT213ORF5665P | |
| 5660 | R | Ngos1291ORF65P (100% identity) | NgoCT213ORF5665P | |
| 5665 | M | M.NgoD159ORF475BP (100% identity) | M.NgoCT213ORF5665BP | |
| 5670 | M | M.NgoD159ORF475AP (100% identity) | M.NgoCT213ORF5665AP | |
| 5675 | type IV pilin protein | |||
| 5850 | excinuclease ABC subunit UvrA | |||
| 5855 | R | Ngo16148ORF6235P (100% identity) | CCGCGG | NgoCT213ORF5860P |
| 5860 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.NgoCT213ORF5860P |
| 5865 | transposase | |||
| 9055 | FUSC family protein | |||
| 9060 | R | Ngos1291ORF3515P (100% identity) | GGCC | NgoCT213ORF9065P |
| 9065 | M | M.Ngos1291ORF3515P (100% identity) | GGCC | M.NgoCT213ORF9065P |
| 9070 | ribosome recycling factor | |||
| 9585 | 93 aa hypothetical protein | |||
| 9590 | R | NgoWSIIIP (100% identity) | GGTGA | NgoCT213ORF9595P |
| 9595 | M | M1.Ngos1291II (100% identity) | GGTGA | M1.NgoCT213ORF9595P |
| 9600 | M | M1.NgoWSIII (100% identity) | GGTGA | M2.NgoCT213ORF9595P |
| 9605 | RNA-binding transcriptional accessory protein | |||
| 10150 | GTPase ObgE | |||
| 10155 | M | M.NgoWFORF2310P (100% identity) | RGCGCY | M.NgoCT213ORF10155P |
| 10160 | R | NgoNG250ORF10820P (100% identity) | RGCGCY | NgoCT213ORF10155P |
| 10165 | cysteine--tRNA ligase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2745 | peptidyl-prolyl cis-trans isomerase | |||
| 2750 | M | M.Ngos1291ORF8455P (100% identity) | CCACC | M.NgoCT213ORF2750P |
| 2755 | R | Ngos1291ORF8455P (100% identity) | CCACC | NgoCT213ORF2750P |
| 2760 | tRNA 2-thiocytidine(32) synthetase TtcA | |||
| 3195 | alpha-hydroxy-acid oxidizing protein | |||
| 3200 | R | NgoWSORF749P (100% identity) | NgoCT213ORF3205P | |
| 3205 | M | M.NgoSW0259ORF3235P (100% identity) | M.NgoCT213ORF3205P | |
| 3210 | 166 aa hypothetical protein | |||