Thiothrix moscowensis isolate RT |
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Putative Thiothrix moscowensis isolate RT RM systems
Ref: Mardanov,A.V. et al. Microorganisms 8 (12), E2030 (2020)
REBASE ref # 32570
GenBank #: JAEHNX000000000
REBASE acronym: TmoRT
Org_num: 50052
All begin JG718_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 17395 | methylamine utilization protein MauG | |||
| 17400 | R | AspSHORF8160P (81% identity) | TmoRTORF17405P | |
| 17405 | M | M.AspAMDI (84% identity) | M.TmoRTORF17405P | |
| 16410 | ATP-binding protein | |||
| 16415 | S | S.Alu2473ORF13100P (51% identity) | S.TmoRTORF16420P | |
| 16420 | M | M.Tni5205ORFDP (88% identity) | M.TmoRTORF16420P | |
| 16425 | type II toxin-antitoxin system VapC family | |||
| 16430 | AbrB/MazE/SpoVT family DNA-binding | |||
| 16435 | R | Nha25378ORFBP (73% identity) | TmoRTORF16420P | |
| 13825 | hydrogenase expression/formation protein HypE | |||
| 13830 | M | M.TspA52ORF3775P (91% identity) | M.TmoRTORF13830P | |
| 13835 | type II toxin-antitoxin system Phd/YefM family | |||
| 13840 | toxin-antitoxin system toxin component, | |||
| 13845 | S | S.GfeZ0531ORF2600P (46% identity) | S.TmoRTORF13830P | |
| 13850 | virulence RhuM family protein | |||
| 13855 | metallophosphatase domain-containing protein | |||
| 13860 | AAA family ATPase | |||
| 13865 | 169 aa hypothetical protein | |||
| 13870 | R | TsiSSD2ORF22280P (88% identity) | TmoRTORF13830P | |
| 13875 | YkgJ family cysteine cluster protein | |||
| 11170 | 56 aa hypothetical protein | |||
| 11175 | R | TspKTORF13125P (94% identity) | TmoRTORF11185P | |
| 11180 | DNA binding domain-containing protein | |||
| 11185 | M | M.TspQ5ORF1010P (95% identity) | M.TmoRTORF11185P | |
| 3495 | 99 aa hypothetical protein | |||
| 3500 | S | S.Pag976ORF4413P (45% identity) | S.TmoRTORF3490P | |
| 3505 | R | NpuORF5347P (57% identity) | TmoRTORF3490P | |
| 3510 | toll/interleukin-1 receptor domain-containing | |||
| 7875 | cytochrome b/b6 domain-containing protein | |||
| 7880 | M | M.Pbr1719ORF6195P (77% identity) | M.TmoRTORF7880P | |
| 7885 | DUF86 domain-containing protein | |||
| 7890 | nucleotidyltransferase family protein | |||
| 7895 | S | S.AspI09ORF23860P (43% identity) | S.TmoRTORF7880P | |
| 7900 | endonuclease domain-containing protein | |||
| 7905 | R | Tni5205ORFLP (80% identity) | TmoRTORF7880P | |
| 7910 | SCP2 sterol-binding domain-containing protein | |||
| 8985 | alkylphosphonate utilization protein | |||
| 8990 | M | M.DspVB142ORF9425P (68% identity) | M.TmoRTORF8990P | |
| 8995 | S | S.GbeBORF3247P (27% identity) | S.TmoRTORF8990P | |
| 4655 | 84 aa hypothetical protein | |||
| 4660 | S | S.MspYRDM1ORF5275P (42% identity) | S.TmoRTORF4675P | |
| 4665 | 125 aa hypothetical protein | |||
| 4670 | 76 aa hypothetical protein | |||
| 4675 | M | M.TspASORF18315P (87% identity) | M.TmoRTORF4675P | |
| 4680 | PIN domain-containing protein | |||
| 4685 | helix-turn-helix transcriptional regulator | |||
| 4690 | R | MspYRDM1ORF5275P (75% identity) | TmoRTORF4675P | |
| 4695 | 780 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17425 | 60 aa hypothetical protein | |||
| 17430 | R | Tca21228ORF474P (93% identity) | TmoRTORF17435P | |
| 17435 | M | M.Tca21228ORF474P (94% identity) | M.TmoRTORF17435P | |
| 17440 | type II toxin-antitoxin system VapC family | |||
| 6980 | 63 aa hypothetical protein | |||
| 6985 | RM | TspQ5ORF14210P (84% identity) | TmoRTORF6985P | |
| 6990 | DNA binding domain-containing protein | |||
| 2015 | ABC transporter permease subunit | |||
| 2020 | R | Asp712ORFAP (75% identity) | TmoRTORF2025P | |
| 2025 | M | M.Crh274ORF4735P (75% identity) | M.TmoRTORF2025P | |
| 2030 | amino acid ABC transporter substrate-binding | |||
| 11500 | cyclic nucleotide-binding/CBS domain-containing | |||
| 11505 | R | Tni5205ORFMP (78% identity) | TmoRTORF11510P | |
| 11510 | M | M.Tni5205ORFMP (88% identity) | M.TmoRTORF11510P | |
| 11515 | lipopolysaccharide heptosyltransferase II | |||
| 2090 | transcription-repair coupling factor | |||
| 2095 | M | M.Tca21228ORF1834P (88% identity) | M.TmoRTORF2095P | |
| 2100 | R | TspA52ORF15860P (86% identity) | TmoRTORF2095P | |
| 2105 | helix-turn-helix transcriptional regulator | |||
| 10335 | DUF262 domain-containing protein | |||
| 10340 | M | M.PspZ82022DndBP (67% identity) | M.TmoRTDndBP | |
| 10345 | DNA phosphorothioation system sulfurtransferase | |||
| 15850 | lipocalin family protein | |||
| 15855 | R | TspQ5ORF13875P (96% identity) | TmoRTORF15860P | |
| 15860 | M | M.TlaMK1ORF7960P (95% identity) | M.TmoRTORF15860P | |
| 15865 | N-acetylglutaminylglutamine amidotransferase | |||
| 10340 | DNA sulfur modification protein DndB | |||
| 10345 | M | M.Pae111DndCP (60% identity) | M.TmoRTDndCP | |
| 10350 | DNA sulfur modification protein DndD | |||
| 10345 | DNA phosphorothioation system sulfurtransferase | |||
| 10350 | M | M.MspC18DndDP (36% identity) | M.TmoRTDndDP | |
| 10355 | DndE family protein | |||
| 10350 | DNA sulfur modification protein DndD | |||
| 10355 | M | M.SstMJL19DndEP (45% identity) | M.TmoRTDndEP | |
| 10360 | 98 aa hypothetical protein | |||
| 14255 | 142 aa hypothetical protein | |||
| 14260 | M | M.Tla21227ORFFP (85% identity) | M.TmoRTORF14260P | |
| 14265 | 105 aa hypothetical protein | |||
| 4020 | ribonucleotide-diphosphate reductase subunit | |||
| 4025 | M | M2.TlaMK1ORF10185P (83% identity) | M.TmoRTORF4025P | |
| 4030 | 494 aa hypothetical protein | |||
| 4025 | DNA cytosine methyltransferase | |||
| 4030 | M | M.TsuDNT53ORFQP (91% identity) | M.TmoRTORF4030P | |
| 4035 | R | TsuDNT53ORFQP (90% identity) | TmoRTORF4030P | |
| 4040 | ribonucleoside-diphosphate reductase subunit | |||
| 9330 | ImmA/IrrE family metallo-endopeptidase | |||
| 9335 | M | M.TspCT3ORF6130P (80% identity) | M.TmoRTORF9335P | |
| 9340 | R | TspQ5ORF7750P (56% identity) | TmoRTORF9335P | |
| 4270 | 225 aa hypothetical protein | |||
| 4275 | M | M.TlaMK1ORF6975P (91% identity) | M.TmoRTORF4275P | |
| 4280 | R | TlaMK1ORF6975P (93% identity) | TmoRTORF4275P | |
| 4285 | LysR family transcriptional regulator | |||
| 660 | D-glycero-beta-D-manno-heptose 1,7-bisphosphate | |||
| 665 | M | M.Cra508ORF13550P (77% identity) | M.TmoRTORF665P | |
| 670 | RdgB/HAM1 family non-canonical purine NTP | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17210 | XisI protein | |||
| 17215 | R | Tni5205ORFBP (91% identity) | TmoRTORF17215P | |
| 17220 | diacylglycerol kinase | |||
| 13330 | Fic family protein | |||
| 13335 | R | TspKTORF14460P (96% identity) | TmoRTORF13340P | |
| 13340 | M | M.TspKTORF14460P (74% identity) | M.TmoRTORF13340P | |
| 13345 | ATP-binding protein | |||