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Putative Thiothrix caldifontis DSM 21228 RM systems
Ref: Varghese,N. and Submissions,S. unpublished
REBASE ref # 22454
Contig set: 3,931,598 bp
GenBank #: FNQP00000000 (NZ_FNQP00000000)
REBASE acronym: Tca21228
Org_num: 50050
All begin SAMN05660964_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
1239 | R | Tla21227ORFBP (84% identity) | Tca21228ORF1239P | |
1240 | 244 aa hypothetical protein | |||
3237 | cell filamentation protein | |||
3238 | S | S1.AcaK524ORF5965P (30% identity) | S.Tca21228ORF3240P | |
3239 | Predicted nuclease of restriction | |||
3240 | M | M.Tla21227ORFDP (94% identity) | M.Tca21228ORF3240P | |
3241 | Predicted NAD/FAD-binding protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
1934 | 106 aa hypothetical protein | |||
1935 | M | M.TspQ5ORF12885P (94% identity) | M.Tca21228ORF1935P | |
1936 | von Willebrand factor type A domain-containing | |||
3649 | nitrogen fixation protein NifX | |||
3650 | M | M.TspCT3ORF5395P (80% identity) | M.Tca21228ORF3650P | |
3651 | R | TspCT3ORF5395P (77% identity) | Tca21228ORF3650P | |
3652 | DNA-binding transcriptional regulator, | |||
590 | Diadenosine tetraphosphate (Ap4A) hydrolase | |||
591 | M | M.TboBBSDndCP (45% identity) | M.Tca21228DndCP | |
592 | DNA sulfur modification protein DndD | |||
591 | DNA sulfur modification protein DndC | |||
592 | M | M.Dli5ac10DndDP (30% identity) | M.Tca21228DndDP | |
593 | DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T | |||
592 | DNA sulfur modification protein DndD | |||
593 | R | Tli06511DptHP (36% identity) | Tca21228DptHP | |
594 | AAA domain-containing protein, putative AbiEii | |||
2151 | 71 aa hypothetical protein | |||
2152 | M | M.Rsp17631ORF2562P (57% identity) | M.Tca21228ORF2152P | |
2153 | restriction system protein | |||
1833 | 454 aa hypothetical protein | |||
1834 | M | M.TspA52ORF15860P (92% identity) | M.Tca21228ORF1834P | |
1835 | R | TspA52ORF15860P (98% identity) | Tca21228ORF1834P | |
1836 | Helix-turn-helix domain-containing protein | |||
665 | large subunit ribosomal protein L27 | |||
666 | M | M.TspCT3ORF4950P (97% identity) | M.Tca21228ORF666P | |
667 | R | TunA1ORF1590P (95% identity) | Tca21228ORF666P | |
668 | GTP-binding protein | |||
1152 | Fic family protein | |||
1153 | RM | Tsp52ORFNP (87% identity) | Tca21228ORF1153P | |
1154 | DNA-binding regulatory protein, YebC/PmpR | |||
437 | ribonucleoside-diphosphate reductase beta chain | |||
438 | M | M.TspASORF14925P (77% identity) | M.Tca21228ORF438P | |
439 | ribonucleoside-diphosphate reductase, alpha | |||
1219 | 394 aa hypothetical protein | |||
1220 | M | M.TspCT3ORF4165P (96% identity) | M.Tca21228ORF1220P | |
1221 | R | TspCT3ORF4165P (97% identity) | Tca21228ORF1220P | |
1222 | Uncharacterized conserved protein YaeQ, | |||
473 | Predicted transcriptional regulator | |||
474 | M | M.TspQ5ORF8375P (96% identity) | M.Tca21228ORF474P | |
475 | R | TspA52ORF4130P (97% identity) | Tca21228ORF474P | |
476 | uncharacterized radical SAM protein YgiQ | |||
769 | serine/threonine-protein kinase HipA | |||
770 | R | Tla21227ORFAP (96% identity) | Tca21228ORF770P | |
771 | 201 aa hypothetical protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
2152 | TaqI-like C-terminal specificity | |||
2153 | R | TspA52MrrP (95% identity) | Tca21228MrrP | |
2154 | Transglycosylase associated protein |