Thiothrix lacustris DSM 21227 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Thiothrix lacustris DSM 21227 RM systems
Ref: Kyrpides,N. et al. unpublished
REBASE ref # 18814
Contig set: 3,713,849 bp
GenBank #: JHYQ00000000 (NZ_JHYQ00000000)
REBASE acronym: Tla21227
Org_num: 50051
All begin ORF_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2 | prepilin-type N-terminal cleavage/methylation domain-containing protein | |||
| 5 | R | TspASORF5175P (96% identity) | Tla21227ORFBP | |
| 12 | 68 aa hypothetical protein | |||
| 2 | DUF1016 domain-containing protein | |||
| 4 | S | S.PspKAN5ORF2980P (40% identity) | S.Tla21227ORFDP | |
| 5 | 101 aa hypothetical protein | |||
| 6 | M | M.TspASORF5175P (98% identity) | M.Tla21227ORFDP | |
| 12 | COG2907: Amine oxidase, flavin-containing | |||
| 6 | 94 aa hypothetical protein | |||
| 7 | R | TspA52ORF4460P (96% identity) | Tla21227ORFLP | |
| 9 | type II toxin-antitoxin system death-on-curing family toxin | |||
| 10 | DNA-binding protein | |||
| 11 | S | S.Ssp4073ORF40580P (52% identity) | S.Tla21227ORFLP | |
| 13 | M | M.TspA52ORF4460P (89% identity) | M.Tla21227ORFLP | |
| 16 | 81 aa hypothetical protein | |||
| 6 | 288 aa hypothetical protein PFWH6_3658 | |||
| 7 | R | TlaMK1ORF16605P (96% identity) | Tla21227ORFEP | |
| 11 | 59 aa hypothetical protein | |||
| 12 | type II toxin-antitoxin system Phd/YefM family antitoxin | |||
| 13 | 61 aa hypothetical protein | |||
| 14 | S | S.Mso21ORFGP (62% identity) | S.Tla21227ORFEP | |
| 15 | DUF1016 family protein | |||
| 16 | 92 aa hypothetical protein | |||
| 17 | M | M.TlaMK1ORF16605P (98% identity) | M.Tla21227ORFEP | |
| 19 | C4-dicarboxylate transporter/malic acid transport protein | |||
| 86 | PAS domain S-box protein | |||
| 88 | R | TlaMK1ORF8010P (99% identity) | TTAGNNNNNTCC | Tla21227ORFGP |
| 91 | 95 aa hypothetical protein | |||
| 92 | DUF559 domain-containing protein | |||
| 93 | 129 aa hypothetical protein | |||
| 94 | 79 aa hypothetical protein | |||
| 95 | HNH endonuclease | |||
| 96 | LOW QUALITY PROTEIN: hypothetical protein Thini_1483 | |||
| 97 | S | S.Tfr49748I (97% identity) | TTAGNNNNNTCC | S.Tla21227ORFGP |
| 98 | M | M.TlaMK1ORF8010P (92% identity) | TTAGNNNNNTCC | M.Tla21227ORFGP |
| 101 | 72 aa hypothetical protein | |||
| 293 | ATP-binding protein | |||
| 297 | S | S.CspP13ORF5605P (38% identity) | S.Tla21227ORFNP | |
| 299 | 71 aa hypothetical protein | |||
| 300 | M | M.TspASORF2890P (99% identity) | M.Tla21227ORFNP | |
| 303 | R | TspQ5ORF1010P (89% identity) | Tla21227ORFNP | |
| 309 | ATP-binding cassette domain-containing protein | |||
| 284 | peptidase M38 | |||
| 285 | R | TspASORF18315P (98% identity) | Tla21227ORFOP | |
| 291 | Fic family protein | |||
| 292 | 102 aa hypothetical protein | |||
| 293 | 74 aa hypothetical protein | |||
| 294 | DUF2559 family protein | |||
| 295 | 97 aa hypothetical protein | |||
| 296 | adenosine monophosphate-protein transferase Fic | |||
| 296 | 59 aa hypothetical protein | |||
| 297 | adenosine monophosphate-protein transferase Fic | |||
| 299 | M | M.TspASORF18315P (96% identity) | M.Tla21227ORFOP | |
| 301 | Uma2 family endonuclease | |||
| 302 | 109 aa hypothetical protein | |||
| 303 | 72 aa hypothetical protein | |||
| 304 | 81 aa hypothetical protein | |||
| 305 | 74 aa hypothetical protein | |||
| 306 | 83 aa hypothetical protein | |||
| 307 | PIN domain-containing protein | |||
| 308 | 74 aa hypothetical protein | |||
| 309 | 75 aa hypothetical protein | |||
| 310 | S | S.MmaA45ORFAP (29% identity) | S.Tla21227ORFOP | |
| 312 | 234 aa hypothetical protein BWK73_36150 | |||
| 428 | 182 aa hypothetical protein | |||
| 429 | M | M.TlaMK1ORF1515P (99% identity) | M.Tla21227ORFQP | |
| 431 | 122 aa hypothetical protein | |||
| 432 | 64 aa hypothetical protein | |||
| 433 | 61 aa hypothetical protein | |||
| 436 | S | S2.TlaMK1ORF1515P (45% identity) | S.Tla21227ORFQP | |
| 437 | 163 aa hypothetical protein BWK73_52980 | |||
| 438 | 64 aa hypothetical protein | |||
| 439 | prevent-host-death family protein | |||
| 440 | 82 aa hypothetical protein | |||
| 441 | R | TlaMK1ORF1515P (98% identity) | Tla21227ORFQP | |
| 445 | 122 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8 | 5'-3' exonuclease | |||
| 9 | RM | TlaWSORF13805P (84% identity) | Tla21227ORFKP | |
| 14 | type II toxin-antitoxin system VapB family antitoxin | |||
| 27 | DNA binding domain-containing protein | |||
| 28 | RM | TlaMK1ORF7705P (76% identity) | Tla21227ORFPP | |
| 30 | 191 aa hypothetical protein A2514_02360 | |||
| 49 | AAA family ATPase | |||
| 51 | RM | TlaWSORF13640P (99% identity) | Tla21227ORFJP | |
| 54 | 91 aa hypothetical protein | |||
| 74 | ImmA/IrrE family metallo-endopeptidase | |||
| 75 | M | M.TlaWSORF19535P (98% identity) | M.Tla21227ORFIP | |
| 79 | S | S.TlaWSORF19535P (82% identity) | S.Tla21227ORFIP | |
| 80 | protein kinase | |||
| 90 | 61 aa hypothetical protein | |||
| 91 | R | TlaWSORF12005P (89% identity) | Tla21227ORFCP | |
| 92 | 148 aa hypothetical protein | |||
| 101 | quinolinate synthase NadA | |||
| 103 | M | M.TlaMK1ORF9770P (99% identity) | M.Tla21227ORFMP | |
| 104 | R | TlaMK1ORF9770P (100% identity) | Tla21227ORFMP | |
| 106 | DEAD/DEAH box helicase | |||
| 101 | toxin-antitoxin system toxin component, PIN family | |||
| 103 | RM | TsuDNT52ORF14380P (69% identity) | Tla21227ORFHP | |
| 108 | transposase | |||
| 120 | 64 aa hypothetical protein | |||
| 121 | M | M.TmoRTORF14260P (85% identity) | M.Tla21227ORFFP | |
| 123 | 151 aa hypothetical protein | |||
| 215 | 305 aa hypothetical protein BWK73_54015 | |||
| 217 | R | Tca21228ORF770P (96% identity) | Tla21227ORFAP | |
| 219 | 113 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 22 | transcriptional regulator | |||
| 23 | R | TspASMrrP (99% identity) | Tla21227MrrP | |
| 25 | 90 aa hypothetical protein | |||