Neisseria meningitidis C311 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Neisseria meningitidis C311 RM systems
Ref: Jen,F. et al. unpublished
REBASE ref # 32838
Complete sequence: 2,311,508 bp
GenBank #: CP079941
REBASE acronym: NgoC311
Org_num: 51162
All begin KZH42_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4960 | ADP-glyceromanno-heptose 6-epimerase | |||
| 4965 | M | M.NmeMC58ORF829P (100% identity) | M.NgoC311ORF4965P | |
| 4970 | virulence RhuM family protein | |||
| ??? | S | S.NmeMC58ORF829P (100% identity) | S.NgoC311ORF4965P | |
| 4985 | AAA family ATPase | |||
| 4990 | type I restriction endonuclease | |||
| 4995 | IS30-like element IS1655 family transposase | |||
| 5000 | R | NmeMC58ORF829BP (99% identity) | NgoC311ORF4965P | |
| 5005 | ATP-dependent Clp protease ATP-binding subunit | |||
| 6880 | uracil-DNA glycosylase | |||
| ??? | M | M.NmeMC58ORF1223P (100% identity) | M.NgoC311ORF6890P | |
| 6905 | M48 family metallopeptidase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1155 | RNA-binding transcriptional accessory protein | |||
| 1160 | M | M1.NmeMC58ORF76P (100% identity) | GGTGA | M1.NgoC311ORF1160P |
| 1165 | M | M2.NmeMC58ORF76P (98% identity) | M2.NgoC311ORF1160P | |
| 1170 | UDP-glucose 4-epimerase GalE | |||
| 4440 | phenylalanine--tRNA ligase subunit alpha | |||
| 4445 | M | M1.NmeMC58IIP (100% identity) | GACGC | M1.NgoC311I |
| 4450 | R | NmeMC58IIP (100% identity) | GACGC | NgoC311IP |
| 4455 | M | M2.NmeMC58II (100% identity) | GACGC | M2.NgoC311I |
| 4460 | phenylalanine--tRNA ligase subunit beta | |||
| 4945 | ADP-heptose synthase | |||
| 4950 | M | M.NmeMC58III (100% identity) | CCAGA | M.NgoC311ORF4950P |
| 4955 | R | NmeMC58IIIP (98% identity) | CCAGA | NgoC311ORF4950P |
| 4960 | ADP-glyceromanno-heptose 6-epimerase | |||
| 6085 | 3-isopropylmalate dehydrogenase | |||
| 6090 | R | NmeW135ORF659P (100% identity) | GGNNCC | NgoC311ORF6095P |
| 6095 | M | M.NmeH44ORF1488P (34% identity) | M.NgoC311ORF6095BP | |
| 6100 | DNA cytosine methyltransferase | |||
| 6105 | M | M.NmeH44ORF1488P (20% identity) | M.NgoC311ORF6095AP | |
| 6110 | 3-isopropylmalate dehydratase small subunit | |||
| 7600 | ribonucleotide-diphosphate reductase subunit | |||
| 7605 | R | NmeMC58ORF1290P (100% identity) | CCWGG | NgoC311ORF7610P |
| 7610 | M | M.NmeMC58ORF1290P (100% identity) | CCWGG | M.NgoC311ORF7610P |
| 7615 | ribonucleoside-diphosphate reductase subunit | |||
| 10730 | leucyl-tRNA synthetase | |||
| 10735 | R | NmeMC58ORF1896P (100% identity) | NgoC311ORF10735P | |
| 10740 | leucine--tRNA ligase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7440 | IS30 family transposase | |||
| 7445 | R | NmeMC58ORF1261P (100% identity) | CCACC | NgoC311ORF7450P |
| 7450 | M | M.NmeH44ORF1675P (92% identity) | CCACC | M.NgoC311ORF7450P |
| 7455 | 53 aa hypothetical protein | |||
| 8040 | tRNA pseudouridine(55) synthase TruB | |||
| 8045 | M | M.NmeMC58I (22% identity) | M.NgoC311ORF8045AP | |
| 8050 | M | M.NmeMC58I (64% identity) | M.NgoC311ORF8045BP | |
| 8055 | R | NmeMC58IP (100% identity) | NgoC311ORF8045P | |
| 8060 | alpha-hydroxy-acid oxidizing protein | |||