Rhodococcus species LW-XY12 |
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Putative Rhodococcus species LW-XY12 RM systems
Ref: Song,X. et al. unpublished
REBASE ref # 32932
| Sequence length: | GenBank #: | |
| Chromosome: | 5,208,978 bp | CP079225 |
| plasmid pLW1: | 253,808 bp | CP079226 |
| plasmid pLW3: | 116,114 bp | CP079228 |
| plasmid pLW4: | 79,434 bp | CP079229 |
REBASE acronym: RspXY12
Org_num: 51442
All begin KXC42_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pLW3 | ||||
| 26375 | 65 aa hypothetical protein | |||
| 26380 | M | M.Rgo13296II (100% identity) | M.RspXY12ORF26380P | |
| ??? | S | S.RruYYLORF10550P (7% identity) | S1.RspXY12ORF26380P | |
| 26385 | S | S.Rgo13296II (99% identity) | GGANNNNNNNGGTC | S2.RspXY12ORF26380P |
| 26390 | R | Rgo13296IIP (100% identity) | RspXY12ORF26380P | |
| 26395 | DEAD/DEAH box helicase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1235 | acyl-CoA dehydrogenase family protein | |||
| 1240 | V | V.RspP52ORF7660P (99% identity) | V.RspXY12ORF1245P | |
| 1245 | M | M.RspRDE2ORF2500P (98% identity) | CTCGAG | M.RspXY12ORF1245P |
| 1250 | 507 aa hypothetical protein CFC35_33630 | |||
| 11350 | BREX system serine/threonine kinase PglW | |||
| 11355 | RM | RrhKG21ORF17020P (96% identity) | RspXY12ORF11355P | |
| 11360 | DUF3644 domain-containing protein | |||
| plasmid pLW4 | ||||
| 26910 | 192 aa hypothetical protein | |||
| 26915 | V | V.Msp18ORF4180P (60% identity) | V.RspXY12ORF26920P | |
| 26920 | M | M.Dal72ORFBP (77% identity) | M.RspXY12ORF26920P | |
| 26925 | 202 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6195 | carotenoid oxygenase family protein | |||
| 6200 | R | RpyPE41MrrP (100% identity) | RspXY12MrrP | |
| 6205 | DUF1906 domain-containing protein | |||
| plasmid pLW1 | ||||
| 25430 | 97 aa hypothetical protein | |||
| 25435 | R | RspAHZY2McrCP (100% identity) | RspXY12McrCP | |
| 25440 | R | RspAHZY2McrBP (95% identity) | RspXY12McrBP | |
| 25445 | 190 aa hypothetical protein | |||