Riemerella anatipestifer RA-YM |
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Putative Riemerella anatipestifer RA-YM RM systems
Ref: Zhou,Z. and Zhang,Y. unpublished
REBASE ref # 32940
Complete sequence: 2,153,508 bp
GenBank #: CP079205
REBASE acronym: RanYM
Org_num: 51455
All begin KYF39_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 8795 | IS982-like element ISRa1 family transposase | |||
| 8800 | M | M.RanYb2ORF9240P (100% identity) | RTANNNNNNRTCG | M.RanYMORF8800P |
| 8805 | S | S.RanYb2ORF9240P (100% identity) | RTANNNNNNRTCG | S.RanYMORF8800P |
| 8810 | R | RanYb2ORF9240P (100% identity) | RTANNNNNNRTCG | RanYMORF8800P |
| 8815 | endonuclease/exonuclease/phosphatase family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2715 | universal stress protein | |||
| 2720 | M | M.RanY11DndCP (100% identity) | GAAC | M.RanYMDndCP |
| 2725 | DNA sulfur modification protein DndD | |||
| 2720 | DNA phosphorothioation system sulfurtransferase | |||
| 2725 | M | M.RanY11DndDP (100% identity) | GAAC | M.RanYMDndDP |
| 2730 | DndE family protein | |||
| 2725 | DNA sulfur modification protein DndD | |||
| 2730 | M | M.RanY11DndEP (100% identity) | GAAC | M.RanYMDndEP |
| 2735 | HmuY family protein | |||
| 6250 | 128 aa hypothetical protein | |||
| 6255 | RM | RanYb2ORF5990P (100% identity) | GAAAGAG | RanYMORF6255P |
| 6260 | 213 aa hypothetical protein | |||
| 7410 | 162 aa hypothetical protein | |||
| 7415 | R | RanXG19ORF1055P (100% identity) | GAATTC | RanYMORF7420P |
| 7420 | M | M.RanXG19ORF1055P (100% identity) | GAATTC | M.RanYMORF7420P |
| 7425 | ATPase | |||
| 9085 | 187 aa hypothetical protein | |||
| 9090 | M | M1.RanYb2ORF9550P (100% identity) | GGATG | M1.RanYMORF9090P |
| 9095 | M | M2.RanYb2ORF9550P (100% identity) | GGATG | M2.RanYMORF9090P |
| 9100 | R | RanYb2ORF9550P (100% identity) | GGATG | RanYMORF9090P |
| 9105 | DUF4469 domain-containing protein | |||
| 9250 | 125 aa hypothetical protein | |||
| 9255 | M | M1.RanYb2ORF9770P (100% identity) | M.RanYMORF9255P | |
| 9260 | type II restriction endonuclease | |||
| 9255 | DNA adenine methylase | |||
| 9260 | R | RanYb2ORF9770P (100% identity) | RanYMORF9265P | |
| 9265 | M | M2.RanYb2ORF9770P (100% identity) | M.RanYMORF9265P | |
| 9270 | GLPGLI family protein | |||