Salmonella enterica subsp. enterica CFSAN058540 |
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Putative Salmonella enterica subsp. enterica CFSAN058540 RM systems
Ref: Hoffmann,M. et al. unpublished
REBASE ref # 32354
Complete sequence: 5,212,792 bp
GenBank #: CP077710
REBASE acronym: Sen58540
Org_num: 51551
All begin DAX88_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 20575 | restriction endonuclease | |||
| 20580 | R | Sen56ORFHP (100% identity) | TAAYNNNNNNNTGGC | Sen58540ORF20585P |
| 20585 | M | M.Sen60I (99% identity) | TAAYNNNNNNNTGGC | M.Sen58540ORF20585P |
| 20590 | S | S.Sen60I (99% identity) | TAAYNNNNNNNTGGC | S.Sen58540ORF20585P |
| 20595 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1680 | cell division protein DamX | |||
| 1685 | M | M.SensS499DamP (100% identity) | GATC | M.Sen58540DamP |
| 1690 | ribulose-phosphate 3-epimerase | |||
| 2210 | DUF2556 family protein | |||
| 2215 | M | M.SensS499ORF2140P (100% identity) | ATGCAT | M.Sen58540ORF2215P |
| 2220 | DNA-binding transcriptional regulator Fis | |||
| 4025 | 74 aa hypothetical protein | |||
| 4030 | M | M.Sen10381ORF758P (94% identity) | M.Sen58540ORF4030P | |
| 4035 | 54 aa hypothetical protein | |||
| 10030 | phosphohydrolase | |||
| 10035 | M | M.Sen60Dcm (100% identity) | CCWGG | M.Sen58540DcmP |
| 10040 | V | V.SensS499DcmP (100% identity) | V.Sen58540DcmP | |
| 10045 | drug/metabolite exporter YedA | |||
| 20980 | DUF4209 domain-containing protein | |||
| 20985 | M | M.Sen56ORFEP (100% identity) | CAGCTG | M.Sen58540ORF20985P |
| 20990 | C | C.Sen44923ORF20725P (100% identity) | C.Sen58540ORF20985P | |
| 20995 | R | Sen7300IIP (76% identity) | CAGCTG | Sen58540ORF20985P |
| 21000 | 208 aa hypothetical protein | |||
| 21000 | 208 aa hypothetical protein | |||
| 21005 | R | Sen56ORFNP (100% identity) | Sen58540ORF21005P | |
| 21010 | 97 aa hypothetical protein | |||
| 21030 | 136 aa hypothetical protein | |||
| 21035 | M | M.Sen44923ORF20775P (100% identity) | GGATCC | M.Sen58540ORF21035P |
| 21040 | helix-turn-helix domain-containing protein | |||
| 21045 | 296 aa hypothetical protein | |||
| 21050 | R | Sen44923ORF20775P (100% identity) | Sen58540ORF21035P | |
| 21055 | 231 aa hypothetical protein | |||
| 22545 | 53 aa hypothetical protein | |||
| 22550 | M | M.Sen7349ORF772P (100% identity) | M.Sen58540ORF22550P | |
| 22555 | DUF4222 domain-containing protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 18655 | 33 aa hypothetical protein | |||
| 18660 | R | Sen60IIP (99% identity) | CAGAG | Sen58540ORF18665P |
| 18665 | M | M.SensS499ORF18165P (100% identity) | CAGAG | M.Sen58540ORF18665P |
| 18670 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 20570 | BrnT family toxin | |||
| 20575 | R | Sen7349MrrP (100% identity) | Sen58540MrrP | |
| 20580 | type I restriction-modification system | |||