Salmonella enterica subsp. enterica CFSAN058588 |
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Putative Salmonella enterica subsp. enterica CFSAN058588 RM systems
Ref: Hoffmann,M. et al. unpublished
REBASE ref # 32354
| Sequence length: | GenBank #: | |
| Chromosome: | 4,666,651 bp | CP077702 |
| plasmid pCFSAN058588: | 85,811 bp | CP077703 |
REBASE acronym: Sen58588
Org_num: 51554
All begin DAX60_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19355 | type IV toxin-antitoxin system YeeU family | |||
| 19360 | M | M1.SenSmo02ORF2465P (100% identity) | GNNTAYNNNNNRTGG | M.Sen58588ORF19360P |
| 19365 | S | S1.SenSmo02ORF2465P (98% identity) | GNNTAYNNNNNRTGG | S.Sen58588ORF19360P |
| 19370 | DUF262 domain-containing protein | |||
| 19375 | DUF262 domain-containing HNH endonuclease family | |||
| 19380 | R | SenSmo02ORF2465P (100% identity) | GNNTAYNNNNNRTGG | Sen58588ORF19360P |
| 19385 | M48 family metallopeptidase | |||
| 19385 | M48 family metallopeptidase | |||
| 19390 | M | M.SenSmo02ORF2495P (100% identity) | M.Sen58588ORF19390P | |
| 19395 | S | S.SenSmo02ORF2495P (100% identity) | S.Sen58588ORF19390P | |
| 19400 | 62 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1730 | cell division protein DamX | |||
| 1735 | M | M.StyTDamP (100% identity) | GATC | M.Sen58588DamP |
| 1740 | ribulose-phosphate 3-epimerase | |||
| 2220 | DUF2556 family protein | |||
| 2225 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen58588ORF2225P |
| 2230 | DNA-binding transcriptional regulator Fis | |||
| 5835 | DUF4060 family protein | |||
| 5840 | M | M.Sens8899ORF5820P (100% identity) | GATC | M.Sen58588ORF5840P |
| 5845 | YqaJ viral recombinase family protein | |||
| 9035 | phosphohydrolase | |||
| 9040 | M | M.Ssp918DcmP (100% identity) | CCWGG | M.Sen58588DcmP |
| 9045 | V | V.StyUK1DcmP (100% identity) | V.Sen58588DcmP | |
| 9050 | drug/metabolite exporter YedA | |||
| 13155 | RusA family crossover junction | |||
| 13160 | M | M.Sens8899ORF12995P (100% identity) | M.Sen58588ORF13160P | |
| 13165 | PerC family transcriptional regulator | |||
| 19335 | YebC/PmpR family DNA-binding transcriptional | |||
| 19340 | R | Ssp8103ORF19015P (100% identity) | Sen58588ORF19340P | |
| 19345 | restriction endonuclease | |||
| plasmid pCFSAN058588 | ||||
| 22740 | 232 aa hypothetical protein | |||
| 22745 | M | M.SenN1543ORF26190P (100% identity) | M.Sen58588ORF22745P | |
| 22750 | recombination-associated protein RdgC | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17260 | 33 aa hypothetical protein | |||
| 17265 | R | Sens8899ORF17105P (100% identity) | CAGAG | Sen58588ORF17270P |
| 17270 | M | M.SspZ69ORF17325P (100% identity) | CAGAG | M.Sen58588ORF17270P |
| 17275 | MFS transporter | |||