Methylococcus capsulatus KN2 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Methylococcus capsulatus KN2 RM systems
Ref: Oshkin,I.Y. unpublished
REBASE ref # 32822
Complete sequence: 3,552,732 bp
GenBank #: CP079097
REBASE acronym: McaKN2
Org_num: 51102
All begin KW114_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3160 | DUF2188 domain-containing protein | |||
| 3165 | M | M.McaNorORF2734P (98% identity) | M.McaKN2ORF3165P | |
| 3170 | virulence RhuM family protein | |||
| 3175 | S | S.McaTexORFMP (62% identity) | S.McaKN2ORF3165P | |
| 3180 | AAA family ATPase | |||
| 3185 | DNA binding domain-containing protein | |||
| 3190 | R | McaTexORFLP (99% identity) | McaKN2ORF3165P | |
| 3195 | M48 family metallopeptidase | |||
| 6850 | 89 aa hypothetical protein | |||
| 6855 | R | McaBCSIIP (97% identity) | McaKN2ORF6860P | |
| 6860 | M | M.McaBCSII (98% identity) | M.McaKN2ORF6860P | |
| 6865 | S | S1.McaNorORF1860P (100% identity) | S1.McaKN2ORF6860P | |
| 6870 | S | S2.McaNorORF1860P (98% identity) | S2.McaKN2ORF6860P | |
| 6875 | AAA family ATPase | |||
| 11570 | 49 aa hypothetical protein | |||
| 11575 | R | MseMP5ORFDP (93% identity) | McaKN2ORF11595P | |
| 11580 | HigA family addiction module antidote protein | |||
| 11585 | killer suppression protein HigA | |||
| 11590 | S | S.Sma854ORF28660P (69% identity) | S.McaKN2ORF11595P | |
| 11595 | M | M.MseMP5ORFDP (92% identity) | M.McaKN2ORF11595P | |
| 11600 | helix-turn-helix domain-containing protein | |||
| 14590 | 82 aa hypothetical protein | |||
| 14595 | M | M.McaTexORFJP (90% identity) | M.McaKN2ORF14595P | |
| 14600 | Fic family protein | |||
| 14605 | nucleotidyltransferase substrate binding | |||
| 14610 | S | S.Xho940ORF32510P (14% identity) | S1.McaKN2ORF14595P | |
| 14615 | S | M.McaNorORF509BP (55% identity) | S2.McaKN2ORF14595P | |
| ??? | S | S2.McaTexORFKP (100% identity) | S3.McaKN2ORF14595P | |
| 14630 | DUF4209 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8255 | type II toxin-antitoxin system PemK/MazF family | |||
| 8260 | M | M.McaTORF3008P (93% identity) | M.McaKN2ORF8260P | |
| 8265 | DUF499 domain-containing protein | |||
| 8325 | DUF4276 family protein | |||
| 8330 | M | M.McaNorORF1884P (72% identity) | M.McaKN2ORF8330P | |
| 8335 | 194 aa hypothetical protein | |||
| 8505 | 122 aa hypothetical protein | |||
| 8510 | M | M.McaBCSORFMP (92% identity) | M1.McaKN2ORF8510P | |
| 8515 | M | M.McaBCSORFNP (94% identity) | M2.McaKN2ORF8510P | |
| 8520 | helix-turn-helix domain-containing protein | |||
| 10335 | 66 aa hypothetical protein | |||
| 10340 | R | Sth15264ORF15880P (94% identity) | McaKN2ORF10340P | |
| 10345 | S-adenosylmethionine-binding protein | |||
| 10340 | restriction endonuclease | |||
| 10345 | M | M.Sth15264ORF15880P (94% identity) | M.McaKN2ORF10345P | |
| 10350 | radical SAM protein | |||
| 10475 | ParM/StbA family protein | |||
| 10480 | M | M.McaGBS15ORF4350P (91% identity) | M.McaKN2ORF10480P | |
| 10485 | DUF87 domain-containing protein | |||
| 10530 | DEAD/DEAH box helicase | |||
| 10535 | RM | CsaHT4ORFIP (64% identity) | McaKN2ORF10535P | |
| 10540 | 649 aa hypothetical protein | |||
| 10700 | 122 aa hypothetical protein | |||
| 10705 | M | M1.McaNorORF1918P (100% identity) | M1.McaKN2ORF10705P | |
| 10710 | M | M2.McaNorORF1918P (100% identity) | M2.McaKN2ORF10705P | |
| 10715 | transcriptional regulator | |||
| 10915 | nucleotide-binding protein | |||
| 10920 | M | M.McaNorORF1884P (61% identity) | M.McaKN2ORF10920P | |
| 10925 | 194 aa hypothetical protein | |||
| 11425 | ATP-dependent Clp protease ATP-binding subunit | |||
| 11430 | R | McaTexORFGP (100% identity) | RGATCY | McaKN2ORF11435P |
| 11435 | M | M.McaTexORFGP (100% identity) | RGATCY | M.McaKN2ORF11435P |
| 11440 | IscS subfamily cysteine desulfurase | |||
| 11610 | ATP-binding protein | |||
| 11615 | M | M.McaGBS15ORF4350P (88% identity) | M.McaKN2ORF11615P | |
| 11620 | IS3 family transposase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9300 | IS5 family transposase | |||
| 9305 | R | McaMIRORF10225P (71% identity) | McaKN2ORF9320P | |
| 9310 | nucleotidyltransferase family protein | |||
| 9315 | endonuclease domain-containing protein | |||
| 9320 | M | M.PspAN1ORF7455P (62% identity) | M.McaKN2ORF9320P | |
| 9325 | 49 aa hypothetical protein | |||
| 10415 | ATP-dependent helicase | |||
| 10420 | M | M.ScaJ1AORFCP (80% identity) | M.McaKN2ORF10420P | |
| 10425 | R | Bmu411ORF4750P (96% identity) | McaKN2ORF10420P | |
| 10430 | ATP-binding protein | |||
| 13075 | RNA methyltransferase | |||
| 13080 | M | M.McaI01ORF3790P (90% identity) | M.McaKN2ORF13080P | |
| 13085 | R | McaTexORFEP (99% identity) | McaKN2ORF13080P | |
| 13090 | 537 aa hypothetical protein | |||