Escherichia coli E15042 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli E15042 RM systems
Ref: Nishida,R. et al. unpublished
REBASE ref # 32712
| Sequence length: | GenBank #: | |
| Chromosome: | 5,365,105 bp | AP024478 |
| plasmid pO121_E15042: | 80,949 bp | AP024479 |
REBASE acronym: EcoE15042
Org_num: 50652
All begin E15042_, E15042_p1-
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5042 | 428 aa hypothetical protein | |||
| 5043 | S | S.SflFF71ORF17365P (100% identity) | TGHAYNNNNCTNC | S.EcoE15042ORF5044P |
| 5044 | M | M.SflFF71ORF17365P (100% identity) | TGHAYNNNNCTNC | M.EcoE15042ORF5044P |
| 5045 | 128 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1167 | 65 aa hypothetical protein | |||
| 1168 | M | M.Eco9255ORF8810P (100% identity) | M.EcoE15042ORF1168P | |
| 1169 | 45 aa hypothetical protein | |||
| 1556 | phage exclusion protein | |||
| 1557 | M | M.Eco9255ORF6545P (100% identity) | M.EcoE15042ORF1557P | |
| 1558 | 192 aa hypothetical protein | |||
| 2352 | amino acid exporter for phenylalanine | |||
| 2353 | V | V.SsoSE61DcmP (100% identity) | V.EcoE15042DcmP | |
| 2354 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.EcoE15042DcmP |
| 2355 | HD superfamily phosphohydrolase | |||
| 2812 | 121 aa hypothetical protein | |||
| 2813 | M | M.Ecoph2011ORFAP (100% identity) | GATC | M.EcoE15042ORF2813P |
| 2814 | endonuclease | |||
| 3138 | 467 aa hypothetical protein | |||
| 3139 | M | M.Eco9255ORF26875P (100% identity) | M.EcoE15042ORF3139P | |
| 3140 | phage antiterminator Q | |||
| 3946 | global DNA-binding transcriptional dual | |||
| 3947 | M | M.Eco9255ORF22605P (100% identity) | ATGCAT | M.EcoE15042ORF3947P |
| 3948 | 59 aa hypothetical protein | |||
| 4054 | D-ribulose-5-phosphate 3-epimerase | |||
| 4055 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoE15042DamP |
| 4056 | cell division protein DamX | |||
| 4726 | 155 aa hypothetical protein | |||
| 4727 | M | M.EcoLSU61ORF26180P (100% identity) | M.EcoE15042ORF4727P | |
| 4728 | 116 aa hypothetical protein | |||
| 5047 | ATP-binding protein | |||
| 5048 | R | EcosB2CORFAP (100% identity) | EcoE15042ORF5048P | |
| 5049 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | |||
| 5132 | 162 aa hypothetical protein | |||
| 5133 | M | M.Sso90ORF15820P (100% identity) | GATC | M.EcoE15042ORF5133P |
| 5134 | repressor | |||
| 5142 | 67 aa hypothetical protein | |||
| 5143 | M | M.Eco9255ORF15920P (100% identity) | M.EcoE15042ORF5143P | |
| 5144 | TciA/TerB-like protein | |||
| plasmid pO121_E15042 | ||||
| 59 | 73 aa hypothetical protein | |||
| 60 | M | M.EcoPV0197ORF42P (100% identity) | SAY | M.EcoE15042ORF60P |
| 61 | 308 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5045 | 128 aa hypothetical protein | |||
| 5046 | R | EcoSO63McrCP (100% identity) | EcoE15042McrCP | |
| 5047 | R | Eco9255McrBP (100% identity) | EcoE15042McrBP | |
| 5048 | restriction endonuclease | |||