Escherichia coli SE14002 |
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Putative Escherichia coli SE14002 RM systems
Ref: Nishida,R. et al. unpublished
REBASE ref # 32712
| Sequence length: | GenBank #: | |
| Chromosome: | 5,236,053 bp | AP024473 |
| plasmid pO121_SE14002: | 88,175 bp | AP024474 |
REBASE acronym: Eco14002
Org_num: 50730
All begin SE14002_, SE14002_p1-
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4897 | 428 aa hypothetical protein | |||
| 4898 | S | S.SflFF71ORF17365P (100% identity) | TGHAYNNNNCTNC | S.Eco14002ORF4899P |
| 4899 | M | M.SflFF71ORF17365P (100% identity) | TGHAYNNNNCTNC | M.Eco14002ORF4899P |
| 4900 | 128 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 271 | 162 aa hypothetical protein | |||
| 272 | M | M.SflLIN17ORF17440P (100% identity) | GATC | M.Eco14002ORF272P |
| 273 | repressor | |||
| 2169 | Shiga toxin 2 subunit A | |||
| 2170 | M | M.EcoE115ORF1522P (100% identity) | M.Eco14002ORF2170P | |
| 2171 | 65 aa hypothetical protein | |||
| 2331 | amino acid exporter for phenylalanine | |||
| 2332 | V | V.SsoSE61DcmP (100% identity) | V.Eco14002DcmP | |
| 2333 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.Eco14002DcmP |
| 2334 | HD superfamily phosphohydrolase | |||
| 2406 | 645 aa hypothetical protein | |||
| 2407 | M | M.EcoSO63ORF26225P (100% identity) | M.Eco14002ORF2407P | |
| 2408 | 65 aa hypothetical protein | |||
| 3868 | global DNA-binding transcriptional dual | |||
| 3869 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco14002ORF3869P |
| 3870 | 59 aa hypothetical protein | |||
| 3973 | D-ribulose-5-phosphate 3-epimerase | |||
| 3974 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco14002DamP |
| 3975 | cell division protein DamX | |||
| 4902 | ATP-binding protein | |||
| 4903 | R | EcosB2CORFAP (100% identity) | Eco14002ORF4903P | |
| 4904 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | |||
| plasmid pO121_SE14002 | ||||
| 16 | 308 aa hypothetical protein | |||
| 17 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco14002ORF17P | |
| 18 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 311 | 42 aa hypothetical protein | |||
| 312 | R | EcoSO63GmrSDP (100% identity) | Eco14002GmrSDP | |
| 313 | 48 aa hypothetical protein | |||
| 4900 | 128 aa hypothetical protein | |||
| 4901 | R | EcoSO63McrCP (100% identity) | Eco14002McrCP | |
| 4902 | R | EcoSO63McrBP (100% identity) | Eco14002McrBP | |
| 4903 | restriction endonuclease | |||