Neisseria gonorrhoeae MS11 |
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Putative Neisseria gonorrhoeae MS11 RM systems
Ref: Jen,F. et al. unpublished
REBASE ref # 32838
Complete sequence: 2,234,079 bp
GenBank #: CP078118
REBASE acronym: NgoMS11
Org_num: 51157
All begin KWY99_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4815 | ADP-glyceromanno-heptose 6-epimerase | |||
| 4820 | M | M.Ngos1291ORF7750P (100% identity) | GCANNNNNNNGTC | M.NgoMS11ORF4820P |
| 4825 | DNA damage-inducible protein D | |||
| ??? | S | S.Ngos1291ORF7750P (100% identity) | GCANNNNNNNGTC | S.NgoMS11ORF4820P |
| 4840 | R | NgoMORF558P (100% identity) | GCANNNNNNNGTC | NgoMS11ORF4820P |
| 4845 | ATP-dependent Clp protease ATP-binding subunit | |||
| 6275 | replication-associated recombination protein A | |||
| 6280 | R | NgoMORF1095P (99% identity) | GAGNNNNNTAC | NgoMS11ORF6305P |
| 6285 | hydroxyacid dehydrogenase | |||
| 6290 | S | S.NgoWSI (100% identity) | GAGNNNNNTAC | S.NgoMS11ORF6305P |
| 6295 | 186 aa hypothetical protein | |||
| 6300 | 280 aa hypothetical protein | |||
| 6305 | M | M.NgoNG250ORF4770P (100% identity) | GAGNNNNNTAC | M.NgoMS11ORF6305P |
| 6310 | ABC transporter | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 565 | FUSC family protein | |||
| ??? | R | NgoMIIP (100% identity) | GGCC | NgoMS11ORF580P |
| 580 | M | M.Ngos1291ORF3515P (100% identity) | GGCC | M.NgoMS11ORF580P |
| 585 | ribosome recycling factor | |||
| 1135 | 93 aa hypothetical protein | |||
| 1140 | R | NgoWSIIIP (100% identity) | GGTGA | NgoMS11IP |
| 1145 | M | M1.Ngos1291II (100% identity) | GGTGA | M1.NgoMS11I |
| 1150 | M | M2.Ngos1291II (100% identity) | GGTGA | M2.NgoMS11I |
| 1155 | RNA-binding transcriptional accessory protein | |||
| 1700 | GTPase ObgE | |||
| 1705 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.NgoMS11ORF1705P |
| 1710 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | NgoMS11ORF1705P |
| 1715 | cysteine--tRNA ligase | |||
| 2790 | leucine--tRNA ligase | |||
| ??? | R | NgoPID18ORF231P (100% identity) | GATC | NgoMS11ORF2795P |
| 2805 | site-specific DNA-methyltransferase | |||
| 2800 | restriction endonuclease | |||
| 2805 | M | M.Ngos1291ORF5755P (100% identity) | M.NgoMS11ORF2805P | |
| 2810 | 184 aa hypothetical protein | |||
| 4290 | phenylalanine--tRNA ligase subunit alpha | |||
| 4295 | V | V.NgoWSORF391P (100% identity) | V.NgoMS11ORF4300P | |
| ??? | M | M.NgoWSORF391P (100% identity) | M.NgoMS11ORF4300P | |
| 4310 | R | Npo18661ORFHP (100% identity) | NgoMS11ORF4300P | |
| 4315 | phenylalanine--tRNA ligase subunit beta | |||
| 4580 | IS1595 family transposase | |||
| 4585 | RM | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | NgoMS11ORF4585P |
| 4590 | S | S.NgoWSORF450P (100% identity) | GACNNNNNTGA | S.NgoMS11ORF4585P |
| 4595 | 140 aa hypothetical protein | |||
| 4615 | uroporphyrinogen decarboxylase | |||
| 4620 | H | H.Ngos1291ORF7560P (100% identity) | H.NgoMS11ORF4630P | |
| 4625 | R | Ngos1291ORF7560P (100% identity) | GCSGC | NgoMS11ORF4630P |
| 4630 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.NgoMS11ORF4630P |
| 4635 | DNA repair protein RadA | |||
| 6165 | 3-isopropylmalate dehydrogenase | |||
| 6170 | R | Ngos1291ORF9120P (100% identity) | GGNNCC | NgoMS11ORF6175P |
| 6175 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.NgoMS11ORF6175P |
| 6180 | 3-isopropylmalate dehydratase small subunit | |||
| 7470 | anthranilate synthase component I | |||
| 7475 | M | M.NgoWLORF1156P (100% identity) | GCCGGC | M.NgoMS11ORF7475P |
| 7480 | R | Ngos1291ORF10080P (100% identity) | GCCGGC | NgoMS11ORF7475P |
| 7485 | 5-(carboxyamino)imidazole ribonucleotide | |||
| 8830 | replication initiation factor domain-containing | |||
| 8835 | V | V.Ngos1291ORF65P (100% identity) | V.NgoMS11ORF8845P | |
| 8840 | R | Ngos1291ORF65P (100% identity) | CCGG | NgoMS11ORF8845P |
| ??? | M | M.NgoMORF2182P (100% identity) | CCGG | M.NgoMS11ORF8845P |
| 8855 | 48 aa hypothetical protein | |||
| 9035 | excinuclease ABC subunit UvrA | |||
| 9040 | R | Ngos1291ORF260P (100% identity) | CCGCGG | NgoMS11ORF9045P |
| 9045 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.NgoMS11ORF9045P |
| 9050 | transposase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5510 | peptidyl-prolyl cis-trans isomerase | |||
| 5515 | M | M.NgoNG290ORF3070P (100% identity) | CCACC | M.NgoMS11ORF5515P |
| 5520 | R | Ngos1291ORF8455P (100% identity) | CCACC | NgoMS11ORF5515P |
| 5525 | tRNA 2-thiocytidine(32) synthetase TtcA | |||
| 5980 | alpha-hydroxy-acid oxidizing protein | |||
| 5985 | R | NgoWSORF749P (100% identity) | GCAGA | NgoMS11ORF5990P |
| ??? | M | M.NgoMORF1159P (100% identity) | GCAGA | M.NgoMS11ORF5990P |
| 6000 | tRNA pseudouridine(55) synthase TruB | |||