Neisseria gonorrhoeae 98D159 |
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Putative Neisseria gonorrhoeae 98D159 RM systems
Ref: Jen,F. et al. unpublished
REBASE ref # 32838
Complete sequence: 2,172,572 bp
GenBank #: CP078114
REBASE acronym: NgoD159
Org_num: 6268
All begin KWY97_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3765 | replication-associated recombination protein A | |||
| 3770 | R | NgoWPIP (99% identity) | GAGNNNNNTAC | NgoD159ORF3795P |
| 3775 | hydroxyacid dehydrogenase | |||
| 3780 | S | S.NgoWSI (100% identity) | GAGNNNNNTAC | S.NgoD159ORF3795P |
| 3785 | 186 aa hypothetical protein | |||
| 3790 | 280 aa hypothetical protein | |||
| 3795 | M | M.Ngo156ORF7535P (100% identity) | GAGNNNNNTAC | M.NgoD159ORF3795P |
| 3800 | ABC transporter | |||
| 6235 | ATP-dependent Clp protease ATP-binding subunit | |||
| 6240 | R | NgoWSIIP (100% identity) | NgoD159ORF6260P | |
| 6245 | S | S2.NgoWSII (100% identity) | GCANNNNNNNNTGC | S2.NgoD159ORF6260P |
| 6250 | S | S1.Ngo30ORF8155P (100% identity) | GCANNNNNNNNTGC | S1.NgoD159ORF6260P |
| 6255 | DNA damage-inducible protein D | |||
| 6260 | M | M.NgoJH7ORFLP (100% identity) | M.NgoD159ORF6260P | |
| 6265 | ADP-glyceromanno-heptose 6-epimerase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 470 | 48 aa hypothetical protein | |||
| 475 | M | M.NgoCT213ORF5665AP (100% identity) | M.NgoD159ORF475AP | |
| 480 | M | M.NgoCT213ORF5665BP (100% identity) | M.NgoD159ORF475BP | |
| 485 | R | NgoWSORF1801P (98% identity) | NgoD159ORF475P | |
| 490 | V | V.Ngos1291ORF65P (100% identity) | V.NgoD159ORF475P | |
| 495 | replication initiation factor domain-containing | |||
| 3655 | 3-isopropylmalate dehydrogenase | |||
| 3660 | R | Ngos1291ORF9120P (100% identity) | GGNNCC | NgoD159ORF3665P |
| 3665 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.NgoD159ORF3665P |
| 3670 | 3-isopropylmalate dehydratase small subunit | |||
| 4645 | anthranilate synthase component I | |||
| 4650 | M | M.NgoWLORF1156P (100% identity) | GCCGGC | M.NgoD159ORF4650P |
| 4655 | R | Ngos1291ORF10080P (100% identity) | GCCGGC | NgoD159ORF4650P |
| 4660 | 5-(carboxyamino)imidazole ribonucleotide | |||
| 6445 | DNA repair protein RadA | |||
| 6450 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.NgoD159ORF6450P |
| 6455 | R | Ngos1291ORF7560P (100% identity) | GCSGC | NgoD159ORF6450P |
| 6460 | H | H.Ngos1291ORF7560P (100% identity) | H.NgoD159ORF6450P | |
| 6465 | uroporphyrinogen decarboxylase | |||
| 6485 | 140 aa hypothetical protein | |||
| 6490 | S | S.NgoWSORF450P (100% identity) | GACNNNNNTGA | S.NgoD159ORF6495P |
| 6495 | RM | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | NgoD159ORF6495P |
| 6500 | IS1595 family transposase | |||
| 6765 | phenylalanine--tRNA ligase subunit beta | |||
| 6770 | R | Npo18661ORFHP (100% identity) | NgoD159ORF6775P | |
| ??? | M | M.NgoWSORF391P (100% identity) | M.NgoD159ORF6775P | |
| 6785 | V | V.NgoWSORF391P (100% identity) | V.NgoD159ORF6775P | |
| 6790 | phenylalanine--tRNA ligase subunit alpha | |||
| 7405 | excinuclease ABC subunit UvrA | |||
| 7410 | R | Ngos1291ORF260P (100% identity) | CCGCGG | NgoD159ORF7415P |
| 7415 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.NgoD159ORF7415P |
| 7420 | transposase | |||
| 8625 | 184 aa hypothetical protein | |||
| 8630 | M | M.NgoWPORF8P (93% identity) | M.NgoD159ORF8630P | |
| 8635 | restriction endonuclease | |||
| 8630 | site-specific DNA-methyltransferase | |||
| 8635 | R | Ngos1291ORF5750P (100% identity) | GATC | NgoD159ORF8635P |
| 8640 | leucine--tRNA ligase | |||
| 9490 | FUSC family protein | |||
| ??? | R | NgoWSORF2276P (100% identity) | GGCC | NgoD159ORF9505P |
| 9505 | M | M.Ngos1291ORF3515P (100% identity) | GGCC | M.NgoD159ORF9505P |
| 9510 | ribosome recycling factor | |||
| 10095 | 93 aa hypothetical protein | |||
| 10100 | R | NgoWSIIIP (100% identity) | GGTGA | NgoD159IIP |
| 10105 | M | M1.Ngos1291II (100% identity) | GGTGA | M1.NgoD159II |
| 10110 | M | M2.Ngos1291II (100% identity) | GGTGA | M2.NgoD159II |
| 10115 | RNA-binding transcriptional accessory protein | |||
| 10630 | GTPase ObgE | |||
| 10635 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.NgoD159ORF10635P |
| 10640 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | NgoD159ORF10635P |
| 10645 | cysteine--tRNA ligase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3010 | peptidyl-prolyl cis-trans isomerase | |||
| 3015 | M | M.NgoSW0032ORF2780P (100% identity) | CCACC | M.NgoD159I |
| 3020 | R | NgoWPIIP (100% identity) | CCACC | NgoD159IP |
| 3025 | tRNA 2-thiocytidine(32) synthetase TtcA | |||
| 3475 | alpha-hydroxy-acid oxidizing protein | |||
| 3480 | R | NgoWGORF1092P (99% identity) | ACACC | NgoD159ORF3485P |
| 3485 | M | M.Ngo9071ORF5590P (98% identity) | ACACC | M.NgoD159ORF3485P |
| 3490 | tRNA pseudouridine(55) synthase TruB | |||