Neisseria gonorrhoeae SK92679 |
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Putative Neisseria gonorrhoeae SK92679 RM systems
Ref: Jen,F. et al. unpublished
REBASE ref # 32838
Complete sequence: 2,173,187 bp
GenBank #: CP078117
REBASE acronym: Ngo2679
Org_num: 51161
All begin KWY95_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5760 | ADP-glyceromanno-heptose 6-epimerase | |||
| 5765 | M | M.NgoPID18ORF652P (100% identity) | M.Ngo2679ORF5765P | |
| 5770 | DNA damage-inducible protein D | |||
| 5775 | S | S.NgoWMII (50% identity) | GCANNNNNNNNTGC | S1.Ngo2679ORF5765P |
| ??? | S | S2.NgoWSII (100% identity) | GCANNNNNNNNTGC | S2.Ngo2679ORF5765P |
| 5785 | R | NgoSW0032ORF2070P (99% identity) | Ngo2679ORF5765P | |
| 5790 | ATP-dependent Clp protease ATP-binding subunit | |||
| 8195 | ABC transporter | |||
| 8200 | M | M.Ngo1204ORF3530P (99% identity) | GAGNNNNNTAC | M.Ngo2679II |
| 8205 | 279 aa hypothetical protein | |||
| 8210 | 186 aa hypothetical protein | |||
| 8215 | S | S.NgoWSI (100% identity) | GAGNNNNNTAC | S.Ngo2679II |
| 8220 | hydroxyacid dehydrogenase | |||
| 8225 | R | NgoWSIP (99% identity) | GAGNNNNNTAC | Ngo2679IIP |
| 8230 | replication-associated recombination protein A | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 190 | replication initiation factor domain-containing | |||
| 195 | V | V.Ngos1291ORF65P (100% identity) | V.Ngo2679ORF205P | |
| 200 | R | Ngos1291ORF65P (100% identity) | Ngo2679ORF205P | |
| ??? | M | M.NgoSH240ORFLP (100% identity) | M.Ngo2679ORF205P | |
| 215 | type IV pilin protein | |||
| 1405 | cysteine--tRNA ligase | |||
| 1410 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | Ngo2679ORF1415P |
| 1415 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.Ngo2679ORF1415P |
| 1420 | GTPase ObgE | |||
| 1940 | RNA-binding transcriptional accessory protein | |||
| 1945 | M | M1.NgoWSIII (100% identity) | GGTGA | M1.Ngo2679III |
| 1950 | M | M1.NgoFQ35ORF11380P (100% identity) | GGTGA | M2.Ngo2679III |
| 1955 | R | NgoWSIIIP (100% identity) | GGTGA | Ngo2679IIIP |
| 1960 | 93 aa hypothetical protein | |||
| 2530 | ribosome recycling factor | |||
| 2535 | M | M.Ngos1291ORF3515P (100% identity) | GGCC | M.Ngo2679ORF2535P |
| ??? | R | NgoWSORF2276P (100% identity) | GGCC | Ngo2679ORF2535P |
| 2550 | FUSC family protein | |||
| 3385 | leucine--tRNA ligase | |||
| 3390 | R | Ngos1291ORF5750P (100% identity) | GATC | Ngo2679ORF3390P |
| ??? | M | M.NgoWPORF8P (100% identity) | M.Ngo2679ORF3390P | |
| 3405 | 184 aa hypothetical protein | |||
| 4595 | transposase | |||
| 4600 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.Ngo2679ORF4600P |
| 4605 | R | Ngos1291ORF260P (100% identity) | CCGCGG | Ngo2679ORF4600P |
| 4610 | excinuclease ABC subunit UvrA | |||
| 5235 | phenylalanine--tRNA ligase subunit alpha | |||
| 5240 | V | V.NgoWSORF391P (100% identity) | V.Ngo2679ORF5245P | |
| ??? | M | M.NgoWSORF391P (100% identity) | M.Ngo2679ORF5245P | |
| 5255 | R | NgoWSORF391P (100% identity) | Ngo2679ORF5245P | |
| 5260 | phenylalanine--tRNA ligase subunit beta | |||
| 5525 | IS1595 family transposase | |||
| 5530 | RM | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | Ngo2679ORF5530P |
| 5535 | S | S.NgoWSORF450P (100% identity) | GACNNNNNTGA | S.Ngo2679ORF5530P |
| 5540 | 140 aa hypothetical protein | |||
| 5560 | uroporphyrinogen decarboxylase | |||
| 5565 | H | H.Ngos1291ORF7560P (100% identity) | H.Ngo2679ORF5575P | |
| 5570 | R | Ngos1291ORF7560P (100% identity) | GCSGC | Ngo2679ORF5575P |
| 5575 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.Ngo2679ORF5575P |
| 5580 | DNA repair protein RadA | |||
| 7360 | 5-(carboxyamino)imidazole ribonucleotide | |||
| 7365 | R | Ngos1291ORF10080P (100% identity) | GCCGGC | Ngo2679ORF7370P |
| 7370 | M | M.Ngos1291ORF10080P (100% identity) | GCCGGC | M.Ngo2679ORF7370P |
| 7375 | anthranilate synthase component I | |||
| 8325 | 3-isopropylmalate dehydratase small subunit | |||
| 8330 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.Ngo2679ORF8330P |
| 8335 | R | NgoWSORF784P (100% identity) | GGNNCC | Ngo2679ORF8330P |
| 8340 | 3-isopropylmalate dehydrogenase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8510 | tRNA pseudouridine(55) synthase TruB | |||
| ??? | M | M.Ngo156ORFAP (99% identity) | M.Ngo2679ORFAP | |
| 8520 | R | Ngo8254ORF1016P (100% identity) | Ngo2679ORFAP | |
| 8525 | alpha-hydroxy-acid oxidizing protein | |||
| 8980 | tRNA 2-thiocytidine(32) synthetase TtcA | |||
| 8985 | R | Ngos1291ORF8455P (100% identity) | CCACC | Ngo2679IP |
| 8990 | M | M.NgoSW0032ORF2780P (100% identity) | CCACC | M.Ngo2679I |
| 8995 | peptidyl-prolyl cis-trans isomerase | |||