Neisseria gonorrhoeae 88G285 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Neisseria gonorrhoeae 88G285 RM systems
Ref: Jen,F. et al. unpublished
REBASE ref # 32838
Complete sequence: 2,174,189 bp
GenBank #: CP078116
REBASE acronym: NgoG285
Org_num: 51154
All begin KWY96_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3330 | replication-associated recombination protein A | |||
| 3335 | R | Ngo205ORF10165P (99% identity) | GAGNNNNNTAC | NgoG285IP |
| 3340 | hydroxyacid dehydrogenase | |||
| 3345 | S | S.NgoWSI (100% identity) | GAGNNNNNTAC | S.NgoG285I |
| 3350 | 186 aa hypothetical protein | |||
| 3355 | 279 aa hypothetical protein | |||
| 3360 | M | M.NgoWSI (100% identity) | GAGNNNNNTAC | M.NgoG285I |
| 3365 | ABC transporter | |||
| 5755 | ATP-dependent Clp protease ATP-binding subunit | |||
| 5760 | R | Ngos1291ORF7750P (100% identity) | GCANNNNNNNGTC | NgoG285ORF5780P |
| ??? | S | S.Ngos1291ORF7750P (100% identity) | GCANNNNNNNGTC | S.NgoG285ORF5780P |
| 5775 | DNA damage-inducible protein D | |||
| 5780 | M | M.Ngos1291ORF7750P (100% identity) | GCANNNNNNNGTC | M.NgoG285ORF5780P |
| 5785 | ADP-glyceromanno-heptose 6-epimerase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 40 | 48 aa hypothetical protein | |||
| ??? | M | M.NgoJH7ORFGP (100% identity) | CCGG | M.NgoG285ORF45P |
| 55 | R | NgoWSORF1801P (98% identity) | CCGG | NgoG285ORF45P |
| 60 | V | V.Ngos1291ORF65P (100% identity) | V.NgoG285ORF45P | |
| 65 | replication initiation factor domain-containing | |||
| 3220 | 3-isopropylmalate dehydrogenase | |||
| 3225 | R | Ngos1291ORF9120P (100% identity) | GGNNCC | NgoG285ORF3230P |
| 3230 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.NgoG285ORF3230P |
| 3235 | 3-isopropylmalate dehydratase small subunit | |||
| 4195 | anthranilate synthase component I | |||
| 4200 | M | M.Ngos1291ORF10080P (100% identity) | GCCGGC | M.NgoG285ORF4200P |
| 4205 | R | Ngos1291ORF10080P (100% identity) | GCCGGC | NgoG285ORF4200P |
| 4210 | 5-(carboxyamino)imidazole ribonucleotide | |||
| 5965 | DNA repair protein RadA | |||
| 5970 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.NgoG285ORF5970P |
| 5975 | R | Ngos1291ORF7560P (100% identity) | GCSGC | NgoG285ORF5970P |
| 5980 | H | H.Ngos1291ORF7560P (100% identity) | H.NgoG285ORF5970P | |
| 5985 | uroporphyrinogen decarboxylase | |||
| 6005 | 140 aa hypothetical protein | |||
| 6010 | S | S.Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | S.NgoG285ORF6015P |
| 6015 | RM | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | NgoG285ORF6015P |
| 6020 | IS1595 family transposase | |||
| 6285 | phenylalanine--tRNA ligase subunit beta | |||
| 6290 | R | Npo18661ORFHP (100% identity) | NgoG285ORF6295P | |
| ??? | M | M.NgoWSORF391P (100% identity) | M.NgoG285ORF6295P | |
| 6305 | V | V.NgoWSORF391P (100% identity) | V.NgoG285ORF6295P | |
| 6310 | phenylalanine--tRNA ligase subunit alpha | |||
| 6930 | excinuclease ABC subunit UvrA | |||
| 6935 | R | Ngos1291ORF260P (100% identity) | CCGCGG | NgoG285ORF6940P |
| 6940 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.NgoG285ORF6940P |
| 6945 | transposase | |||
| 8140 | 184 aa hypothetical protein | |||
| 8145 | M | M.NgoWPORF8P (93% identity) | M.NgoG285ORF8145P | |
| 8150 | R | Ngos1291ORF5750P (100% identity) | GATC | NgoG285ORF8145P |
| 8155 | leucine--tRNA ligase | |||
| 8990 | FUSC family protein | |||
| ??? | R | NgoWSORF2276P (100% identity) | GGCC | NgoG285ORF9005P |
| 9005 | M | M.Ngos1291ORF3515P (100% identity) | GGCC | M.NgoG285ORF9005P |
| 9010 | ribosome recycling factor | |||
| 9585 | IS5/IS1182 family transposase | |||
| 9590 | R | NgoWSIIIP (100% identity) | GGTGA | NgoG285IIIP |
| 9595 | M | M1.NgoJH17ORFQP (100% identity) | GGTGA | M1.NgoG285III |
| 9600 | M | M2.Ngos1291II (100% identity) | GGTGA | M2.NgoG285III |
| 9605 | RNA-binding transcriptional accessory protein | |||
| 10125 | GTPase ObgE | |||
| 10130 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.NgoG285ORF10130P |
| 10135 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | NgoG285ORF10130P |
| 10140 | cysteine--tRNA ligase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2570 | peptidyl-prolyl cis-trans isomerase | |||
| ??? | M | M.Ngos1291ORF8455P (100% identity) | CCACC | M.NgoG285ORF2575P |
| 2580 | R | Ngos1291ORF8455P (100% identity) | CCACC | NgoG285ORF2575P |
| 2585 | tRNA 2-thiocytidine(32) synthetase TtcA | |||
| 3035 | alpha-hydroxy-acid oxidizing protein | |||
| 3040 | R | NgoWPORF742P (100% identity) | GCAGA | NgoG285IIP |
| 3045 | M | M.Ngo5105ORF5810P (100% identity) | GCAGA | M.NgoG285II |
| 3050 | tRNA pseudouridine(55) synthase TruB | |||