Neisseria gonorrhoeae O2D156 |
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Putative Neisseria gonorrhoeae O2D156 RM systems
Ref: Jen,F. et al. unpublished
REBASE ref # 32838
Complete sequence: 2,165,933 bp
GenBank #: CP078113
REBASE acronym: Ngo156
Org_num: 51160
All begin KWY94_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5080 | ADP-glyceromanno-heptose 6-epimerase | |||
| 5085 | M | M.NgoJH7ORFLP (100% identity) | GCANNNNNNNGTC | M.Ngo156ORF5085P |
| 5090 | DNA damage-inducible protein D | |||
| ??? | S | S.NgoTFGB2ORFAP (100% identity) | GCANNNNNNNGTC | S.Ngo156ORF5085P |
| 5105 | R | NgoWSIIP (100% identity) | GCANNNNNNNGTC | Ngo156ORF5085P |
| 5110 | ATP-dependent Clp protease ATP-binding subunit | |||
| 7530 | ABC transporter | |||
| 7535 | M | M.NgoD159ORF3795P (100% identity) | GAGNNNNNTAC | M.Ngo156ORF7535P |
| 7540 | 280 aa hypothetical protein | |||
| 7545 | 186 aa hypothetical protein | |||
| 7550 | S | S.NgoWSI (100% identity) | GAGNNNNNTAC | S.Ngo156ORF7535P |
| 7555 | hydroxyacid dehydrogenase | |||
| 7560 | R | NgoCT213ORF3510P (99% identity) | GAGNNNNNTAC | Ngo156ORF7535P |
| 7565 | replication-associated recombination protein A | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 715 | cysteine--tRNA ligase | |||
| 720 | R | Ngos1291ORF4640P (100% identity) | RGCGCY | Ngo156ORF725P |
| 725 | M | M.Ngos1291ORF4640P (100% identity) | RGCGCY | M.Ngo156ORF725P |
| 730 | GTPase ObgE | |||
| 1245 | RNA-binding transcriptional accessory protein | |||
| 1250 | M | M2.Ngos1291II (100% identity) | GGTGA | M1.Ngo156I |
| 1255 | M | M1.Ngos1291II (100% identity) | GGTGA | M2.Ngo156I |
| 1260 | R | NgoWSIIIP (100% identity) | GGTGA | Ngo156IP |
| 1265 | 93 aa hypothetical protein | |||
| 1840 | ribosome recycling factor | |||
| 1845 | M | M.Ngos1291ORF3515P (99% identity) | GGCC | M.Ngo156ORF1845P |
| ??? | R | NgoWSORF2276P (100% identity) | GGCC | Ngo156ORF1845P |
| 1860 | FUSC family protein | |||
| 2705 | leucine--tRNA ligase | |||
| 2710 | R | Ngos1291ORF5750P (100% identity) | GATC | Ngo156ORF2710P |
| ??? | modification methylase DpnIIB | |||
| 2710 | restriction endonuclease | |||
| ??? | M | M.NgoWPORF8P (100% identity) | M.Ngo156ORF2715P | |
| 2725 | 184 aa hypothetical protein | |||
| 3920 | transposase | |||
| 3925 | M | M.Ngos1291ORF260P (100% identity) | CCGCGG | M.Ngo156ORF3925P |
| 3930 | R | Ngos1291ORF260P (100% identity) | CCGCGG | Ngo156ORF3925P |
| 3935 | excinuclease ABC subunit UvrA | |||
| 4545 | phenylalanine--tRNA ligase subunit alpha | |||
| 4550 | V | V.NgoWSORF391P (100% identity) | V.Ngo156ORF4555P | |
| ??? | M | M.NgoWSORF391P (100% identity) | M.Ngo156ORF4555P | |
| 4565 | R | Npo18661ORFHP (100% identity) | Ngo156ORF4555P | |
| 4570 | phenylalanine--tRNA ligase subunit beta | |||
| 4840 | IS1595 family transposase | |||
| 4845 | RM | Ngos1291ORF7515P (100% identity) | GACNNNNNTGA | Ngo156ORF4845P |
| 4850 | S | S.NgoWSORF450P (100% identity) | GACNNNNNTGA | S.Ngo156ORF4845P |
| 4855 | 140 aa hypothetical protein | |||
| 4875 | uroporphyrinogen decarboxylase | |||
| 4880 | H | H.Ngos1291ORF7560P (100% identity) | H.Ngo156ORF4890P | |
| 4885 | R | Ngos1291ORF7560P (100% identity) | GCSGC | Ngo156ORF4890P |
| 4890 | M | M.Ngos1291ORF7560P (100% identity) | GCSGC | M.Ngo156ORF4890P |
| 4895 | DNA repair protein RadA | |||
| 6685 | 5-(carboxyamino)imidazole ribonucleotide | |||
| 6690 | R | Ngos1291ORF10080P (100% identity) | GCCGGC | Ngo156ORF6695P |
| 6695 | M | M.NgoWLORF1156P (100% identity) | GCCGGC | M.Ngo156ORF6695P |
| 6700 | anthranilate synthase component I | |||
| 7660 | 3-isopropylmalate dehydratase small subunit | |||
| 7665 | M | M.NmeMBW2ORFJP (100% identity) | GGNNCC | M.Ngo156ORF7665P |
| 7670 | R | Ngos1291ORF9120P (100% identity) | GGNNCC | Ngo156ORF7665P |
| 7675 | 3-isopropylmalate dehydrogenase | |||
| 10850 | replication initiation factor domain-containing | |||
| 10855 | V | V.Ngos1291ORF65P (100% identity) | V.Ngo156ORF10865P | |
| 10860 | R | Ngos1291ORF65P (100% identity) | CCGG | Ngo156ORF10865P |
| ??? | M | M.NgoMS11ORF8845P (100% identity) | CCGG | M.Ngo156ORF10865P |
| 10875 | 48 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7840 | tRNA pseudouridine(55) synthase TruB | |||
| ??? | M | M.Ngo2679ORFAP (99% identity) | M.Ngo156ORFAP | |
| 7850 | R | Ngo207ORF7150P (99% identity) | Ngo156ORFAP | |
| 7855 | alpha-hydroxy-acid oxidizing protein | |||
| 8305 | tRNA 2-thiocytidine(32) synthetase TtcA | |||
| 8310 | R | NgoWPIIP (100% identity) | CCACC | Ngo156ORF8315P |
| 8315 | M | M.Ngos1291ORF8455P (100% identity) | CCACC | M.Ngo156ORF8315P |
| 8320 | peptidyl-prolyl cis-trans isomerase | |||