Enterococcus faecium F179 |
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Putative Enterococcus faecium F179 RM systems
Ref: Biggel,M. unpublished
REBASE ref # 31800
| Sequence length: | GenBank #: | |
| Chromosome: | 2,602,775 bp | CP072884 |
| plasmid pF179_1: | 174,746 bp | CP072885 |
REBASE acronym: EfaF179
Org_num: 50577
All begin J9540_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3405 | tyrosine-type recombinase/integrase | |||
| 3410 | M | M.EfaSZ142ORF285P (95% identity) | M.EfaF179ORF3410P | |
| 3415 | S | S.Hsp2008ORF4945P (34% identity) | S.EfaF179ORF3410P | |
| 3420 | 251 aa hypothetical protein | |||
| 3425 | R | EfaSZ142ORF285P (97% identity) | EfaF179ORF3410P | |
| 3430 | sigma-70 family RNA polymerase sigma factor | |||
| plasmid pF179_1 | ||||
| 13255 | recombinase family protein | |||
| 13260 | S | S.ElaE843ORF675P (100% identity) | S.EfaF179ORF13265P | |
| 13265 | M | M.ElaE843ORF675P (100% identity) | M.EfaF179ORF13265P | |
| 13270 | SinI family restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5520 | 128 aa hypothetical protein | |||
| 5525 | M | M.EhiS463ORF7980P (100% identity) | M.EfaF179ORF5525P | |
| 5530 | 69 aa hypothetical protein | |||
| plasmid pF179_1 | ||||
| 12700 | ParA family protein | |||
| 12705 | RM | Efas116ORF12270P (100% identity) | EfaF179ORF12705P | |
| 12710 | 163 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8250 | 92 aa hypothetical protein | |||
| 8255 | R | EfaH7McrCP (99% identity) | EfaF179McrCP | |
| 8260 | R | EfaH7McrBP (99% identity) | EfaF179McrBP | |
| 8265 | helix-turn-helix domain-containing protein | |||