Enterococcus faecium F39 |
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Putative Enterococcus faecium F39 RM systems
Ref: Biggel,M. unpublished
REBASE ref # 31800
| Sequence length: | GenBank #: | |
| Chromosome: | 2,448,233 bp | CP072881 |
| plasmid pF39_1: | 183,270 bp | CP072882 |
REBASE acronym: EfaF39
Org_num: 50578
All begin J9541_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pF39_1 | ||||
| 12250 | AAA family ATPase | |||
| 12255 | R | EhiTF34ORF13310P (99% identity) | EfaF39ORF12265P | |
| 12260 | S | S.Efa263ORF14770P (100% identity) | S.EfaF39ORF12265P | |
| 12265 | M | M.EfaJP3ORF10275P (99% identity) | M.EfaF39ORF12265P | |
| 12270 | 99 aa hypothetical protein | |||
| 12425 | IS3 family transposase | |||
| ??? | S | S.EfaTF512ORF13890P (100% identity) | S.EfaF39ORF12440P | |
| 12440 | M | M.EfaTF512ORF13890P (100% identity) | M.EfaF39ORF12440P | |
| 12445 | SinI family restriction endonuclease | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3465 | class A sortase | |||
| 3470 | M | M.EceSA3ORFAP (99% identity) | M.EfaF39ORF3470P | |
| 3475 | R | Efa5147ORFAP (97% identity) | EfaF39ORF3470P | |
| 3480 | 301 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pF39_1 | ||||
| 12240 | GlsB/YeaQ/YmgE family stress response membrane | |||
| 12245 | R | EhiTF52McrCP (100% identity) | EfaF39McrCP | |
| 12250 | R | Efa8148McrBP (99% identity) | EfaF39McrBP | |
| 12255 | HsdR family type I site-specific | |||