Enterococcus faecium F88 |
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Putative Enterococcus faecium F88 RM systems
Ref: Biggel,M. unpublished
REBASE ref # 31800
| Sequence length: | GenBank #: | |
| Chromosome: | 2,608,143 bp | CP072878 |
| plasmid pF88_1: | 246,327 bp | CP072879 |
REBASE acronym: EfaF88
Org_num: 50579
All begin J9539_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pF88_1 | ||||
| 13550 | type II restriction endonuclease | |||
| 13555 | M | M.EfaK6DORF27120P (100% identity) | M.EfaF88ORF13555P | |
| 13560 | IS30 family transposase | |||
| 13675 | N-6 DNA methylase | |||
| ??? | S | S.EfaTF512ORF13890P (100% identity) | S.EfaF88ORF13680P | |
| 13690 | IS3 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4840 | 78 aa hypothetical protein | |||
| 4845 | M | M.EhiS463ORF7980P (100% identity) | M.EfaF88ORF4845P | |
| 4850 | choloylglycine hydrolase | |||
| plasmid pF88_1 | ||||
| 13620 | 42 aa hypothetical protein | |||
| 13625 | M | M.EfaSZ47ORF445P (100% identity) | M.EfaF88ORF13625P | |
| 13630 | DUF262 domain-containing protein | |||
| 13625 | adenine-specific methyltransferase EcoRI family | |||
| 13630 | R | EfaSZ47ORF445P (100% identity) | EfaF88ORF13630P | |
| 13635 | tyrosine-type recombinase/integrase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1260 | type I restriction endonuclease subunit R | |||
| 1265 | R | EfaK6DMcrBP (100% identity) | EfaF88McrBP | |
| 1270 | R | EfaK6DMcrCP (100% identity) | EfaF88McrCP | |
| 1275 | IS256 family transposase | |||