Rhizobium etli CFN 42 |
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Putative Rhizobium etli CFN 42 RM systems
Ref: Gonzalez,V. et al. Proc. Natl. Acad. Sci. U.S.A. 103 (10), 3834-3839 (2006) In press
REBASE ref # 9289
| Sequence length: | GenBank #: | |
| Chromosome: | 4,381,608 bp | CP000133 (NC_007761) |
| plasmid p42f: | 642,517 bp | CP000138 (NC_007766) |
REBASE acronym: Ret42
Org_num: 4254
All begin RHE_CH, RHE_PF
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1976 | 350 aa hypothetical conserved protein | |||
| ??? | M | M.Atu13543ORF4401P (78% identity) | M.Ret42ORF1977P | |
| 1978 | 333 aa hypothetical conserved protein | |||
| plasmid p42f | ||||
| 107 | 578 aa hypothetical conserved protein | |||
| 108 | M | M.Rae950ORFFP (92% identity) | ACCGGT | M.Ret42ORF108P |
| 109 | 193 aa hypothetical protein | |||
| ??? | V | V.Sme4ORF23P (91% identity) | V.Ret42ORF108P | |
| 111 | 169 aa hypothetical protein | |||
| 110 | probable DNA mismatch endonuclease protein | |||
| 111 | R | Rae950ORFGP (89% identity) | Ret42ORF111P | |
| 112 | 216 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 235 | probable recombinase, resolvase family | |||
| 236 | R | Rsp894Mrr2P (65% identity) | Ret42MrrP | |
| 237 | probable insertion sequence transposase protein, | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 994 | 116 aa hypothetical conserved protein | |||
| 995 | M | M.RetMim1ORF1016P (100% identity) | GANTC | M.Ret42ORF995P |
| 996 | probable hydrolase protein | |||