Treponema denticola ASLM |
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Putative Treponema denticola ASLM RM systems
Ref: Johnston,C.D. and Fenno,J.C. unpublished
REBASE ref # 32542
Complete sequence: 2,773,962 bp
GenBank #: CP076748
REBASE acronym: TdeASLM
Org_num: 49941
All begin KP613_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 12930 | GNAT family N-acetyltransferase | |||
| 12935 | R | TspB152ORF210P (100% identity) | TdeASLMORF12940P | |
| 12940 | M | M.TspB152ORF210P (100% identity) | M.TdeASLMORF12940P | |
| 12945 | Fic family protein | |||
| 12950 | S | S1.TspB152ORF210P (99% identity) | S1.TdeASLMORF12940P | |
| 12955 | S | S2.TdeOT2BORF210P (75% identity) | S2.TdeASLMORF12940P | |
| 12960 | tyrosine-type recombinase/integrase | |||
| 12965 | S | S3.TspB152ORF210P (100% identity) | S3.TdeASLMORF12940P | |
| 12970 | EamA family transporter | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1350 | ATP-binding protein | |||
| 1355 | M | M.TspB152ORF1550P (100% identity) | M.TdeASLMORF1355P | |
| 1360 | tRNA preQ1(34) S-adenosylmethionine | |||
| 6745 | 230 aa hypothetical protein | |||
| 6750 | M | M.TspB152ORF6920P (100% identity) | M1.TdeASLMORF6750P | |
| 6755 | R | TspB152ORF6930P (100% identity) | TdeASLMORF6750P | |
| 6760 | M | M.TspB152ORF6930P (100% identity) | M2.TdeASLMORF6750P | |
| 6765 | phosphoribosylamine--glycine ligase | |||
| 8230 | SIR2 family protein | |||
| 8235 | S | S.TspB152ORF8405P (99% identity) | CTANNNNNTGC | S.TdeASLMI |
| 8240 | M | M.TspB152ORF8405P (100% identity) | CTANNNNNTGC | M.TdeASLMI |
| 8245 | ABC transporter ATP-binding protein/permease | |||
| 9105 | MFS transporter | |||
| 9110 | M | M.TspB152ORF9295P (100% identity) | RAATTY | M.TdeASLMII |
| 9115 | paraslipin | |||
| 10245 | response regulator | |||
| 10250 | R | TspB152ORF10440P (100% identity) | TdeASLMORF10255P | |
| 10255 | M | M.TspB152ORF10440P (100% identity) | M.TdeASLMORF10255P | |
| 10260 | DDE-type integrase/transposase/recombinase | |||
| 11540 | 264 aa hypothetical protein | |||
| 11545 | M | M.TspB152ORF11715P (100% identity) | M.TdeASLMORF11545P | |
| 11550 | 380 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6685 | TIGR01440 family protein | |||
| 6690 | R | TspB152ORF6865P (100% identity) | TdeASLMORF6695P | |
| 6695 | M | M.TspB152ORF6865P (100% identity) | M.TdeASLMORF6695P | |
| 6700 | helix-turn-helix domain-containing protein | |||
| 12290 | S9 family peptidase | |||
| 12295 | M | M.TspB152ORF12470P (100% identity) | CTAAT | M.TdeASLMIII |
| 12300 | DUF3298 and DUF4163 domain-containing protein | |||