Dickeya dadantii S3-1 |
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Putative Dickeya dadantii S3-1 RM systems
Ref: Lee,Y.-A. unpublished
REBASE ref # 32690
Complete sequence: 5,065,613 bp
GenBank #: CP076386
REBASE acronym: DdaS31
Org_num: 50506
All begin KNV89_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 12240 | restriction endonuclease subunit S | |||
| 12245 | M | M.Dla30899ORF9340P (95% identity) | M.DdaS31ORF12245P | |
| 12250 | S | S1.Mmo8481ORF3420P (56% identity) | S.DdaS31ORF12245P | |
| 12255 | virulence RhuM family protein | |||
| 12260 | R | Dda586ORF397P (95% identity) | DdaS31ORF12245P | |
| 12265 | M48 family metallopeptidase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6945 | DNA topoisomerase III | |||
| 6950 | M | M.PcaZJ42ORF13765P (97% identity) | M.DdaS31ORF6950P | |
| 6955 | GTPase | |||
| 7870 | ribulose-phosphate 3-epimerase | |||
| 7875 | M | M.DdaFZ06ORFCP (99% identity) | GATC | M.DdaS31DamP |
| 7880 | SPOR domain-containing protein | |||
| 8935 | phosphoadenosine phosphosulfate reductase family | |||
| 8940 | M | M.Dpa2511ORFFP (97% identity) | M.DdaS31ORF8940P | |
| 8945 | TraR/DksA family transcriptional regulator | |||
| 14730 | Fic family protein | |||
| 14735 | M | M.PspDA100ORF17345P (68% identity) | M.DdaS31ORF14735P | |
| 14740 | 226 aa hypothetical protein | |||
| 18715 | integrase | |||
| 18720 | R | Fnu048DptFP (85% identity) | DdaS31DptFP | |
| 18725 | DNA phosphorothioation-dependent restriction | |||
| 18720 | DNA phosphorothioation-dependent restriction | |||
| 18725 | R | KspWEM22DptGP (67% identity) | DdaS31DptGP | |
| 18730 | DNA phosphorothioation-dependent restriction | |||
| 18725 | DNA phosphorothioation-dependent restriction | |||
| 18730 | R | Sen1006DptHP (89% identity) | DdaS31DptHP | |
| 18735 | restriction endonuclease | |||
| 18750 | methyltransferase domain-containing protein | |||
| 18755 | M | M.Dso5647DndEP (99% identity) | M.DdaS31DndEP | |
| 18760 | DNA sulfur modification protein DndD | |||
| 18755 | DNA sulfur modification protein DndE | |||
| 18760 | M | M.Dso5647DndDP (98% identity) | M.DdaS31DndDP | |
| 18765 | DNA phosphorothioation system sulfurtransferase | |||
| 18760 | DNA sulfur modification protein DndD | |||
| 18765 | M | M.Dso5647DndCP (99% identity) | M.DdaS31DndCP | |
| 18770 | DNA sulfur modification protein DndB | |||
| 18765 | DNA phosphorothioation system sulfurtransferase | |||
| 18770 | M | M.Dso5647DndBP (100% identity) | M.DdaS31DndBP | |
| 18775 | 60 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 12265 | M48 family metallopeptidase | |||
| 12270 | R | Eps158MrrP (90% identity) | DdaS31MrrP | |
| 12275 | inovirus Gp2 family protein | |||
| 12410 | 112 aa hypothetical protein | |||
| 12415 | R | DdaFZ06McrBP (98% identity) | DdaS31McrBP | |
| 12420 | R | DdaFZ06McrCP (99% identity) | DdaS31McrCP | |
| 12425 | 267 aa hypothetical protein | |||