Salmonella enterica subsp. enterica serovar Enteritidis CFSAN022640 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica subsp. enterica serovar Enteritidis CFSAN022640 RM systems
Ref: Hoffmann,M. et al. unpublished
REBASE ref # 32354
Complete sequence: 4,685,965 bp
GenBank #: CP075019
REBASE acronym: Sen22640
Org_num: 51584
All begin AIQ04_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 19370 | restriction endonuclease | |||
| 19375 | M | M.StySBLI (100% identity) | GGYANNNNNNTCG | M.Sen22640ORF19375P |
| 19380 | S | S.StySBLI (100% identity) | GGYANNNNNNTCG | S.Sen22640ORF19375P |
| 19385 | R | SenSA608ORF19700P (99% identity) | GGYANNNNNNTCG | Sen22640ORF19375P |
| 19390 | DUF91 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1775 | cell division protein DamX | |||
| 1780 | M | M.StyTDamP (100% identity) | GATC | M.Sen22640DamP |
| 1785 | ribulose-phosphate 3-epimerase | |||
| 2265 | DUF2556 family protein | |||
| 2270 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen22640ORF2270P |
| 2275 | DNA-binding transcriptional regulator Fis | |||
| 3155 | TraR/DksA family transcriptional regulator | |||
| 3160 | M | M.Sen628ORF3525P (97% identity) | M.Sen22640ORF3160P | |
| 3165 | replication endonuclease | |||
| 13555 | drug/metabolite exporter YedA | |||
| 13560 | V | V.StyUK1DcmP (100% identity) | V.Sen22640DcmP | |
| 13565 | M | M.SspZ69DcmP (100% identity) | CCWGG | M.Sen22640DcmP |
| 13570 | phosphohydrolase | |||
| 19500 | YebC/PmpR family DNA-binding transcriptional | |||
| 19505 | R | SspSAL045ORF19515P (100% identity) | Sen22640ORF19505P | |
| 19510 | IS3 family transposase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17280 | 33 aa hypothetical protein | |||
| 17285 | R | SspSAL045ORF17295P (100% identity) | CAGAG | Sen22640ORF17290P |
| 17290 | M | M.SensIBG7b4ORF17175P (100% identity) | CAGAG | M.Sen22640ORF17290P |
| 17295 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19365 | N-6 DNA methylase | |||
| 19370 | R | Ssp3CMrrP (100% identity) | Sen22640MrrP | |
| 19375 | type I restriction-modification system subunit | |||