Salmonella enterica subsp. enterica serovar Pullorum CFSAN022642 |
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Putative Salmonella enterica subsp. enterica serovar Pullorum CFSAN022642 RM systems
Ref: Hoffmann,M. et al. unpublished
REBASE ref # 32354
Complete sequence: 4,689,720 bp
GenBank #: CP075018
REBASE acronym: Sen22642
Org_num: 51615
All begin AIQ06_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3765 | aldehyde dehydrogenase family protein | |||
| 3770 | R | StySBLI (36% identity) | GGYANNNNNNTCG | Sen22642ORF3780P |
| 3775 | S | S.Ssp1806ORF19520P (100% identity) | GGYANNNNNNTCG | S.Sen22642ORF3780P |
| 3780 | M | M.StySBLI (100% identity) | GGYANNNNNNTCG | M.Sen22642ORF3780P |
| 3785 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1770 | cell division protein DamX | |||
| 1775 | M | M.StyTDamP (100% identity) | GATC | M.Sen22642DamP |
| 1780 | ribulose-phosphate 3-epimerase | |||
| 3660 | IS3 family transposase | |||
| 3665 | R | SenCY16ORF3680P (100% identity) | Sen22642ORF3665P | |
| 3670 | YebC/PmpR family DNA-binding transcriptional | |||
| 13240 | drug/metabolite exporter YedA | |||
| 13245 | V | V.StyUK1DcmP (100% identity) | V.Sen22642DcmP | |
| 13250 | M | M.Ssp1806DcmP (100% identity) | CCWGG | M.Sen22642DcmP |
| 13255 | phosphohydrolase | |||
| 17670 | replication endonuclease | |||
| 17675 | M | M.SenCY16ORF17805P (100% identity) | GATC | M.Sen22642ORF17675P |
| 17680 | TraR/DksA family transcriptional regulator | |||
| 20830 | DNA-binding transcriptional regulator Fis | |||
| 20835 | M | M.Ssp1806ORF2265P (100% identity) | ATGCAT | M.Sen22642ORF20835P |
| 20840 | DUF2556 family protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 16740 | 33 aa hypothetical protein | |||
| ??? | R | Sen5078ORF2615P (100% identity) | Sen22642ORF16745P | |
| 16750 | site-specific DNA-methyltransferase | |||
| 16740 | 33 aa hypothetical protein | |||
| 16745 | R | Ssp1806ORF16970P (100% identity) | Sen22642ORF16750P | |
| 16750 | M | M.SenCY16ORF16870P (100% identity) | M.Sen22642ORF16750P | |
| 16755 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3780 | type I restriction-modification system subunit | |||
| 3785 | R | Ssp1806MrrP (100% identity) | Sen22642MrrP | |
| 3790 | N-6 DNA methylase | |||