Salmonella enterica CFSAN029878 |
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Putative Salmonella enterica CFSAN029878 RM systems
Ref: Hoffmann,M. et al. unpublished
REBASE ref # 32354
Complete sequence: 4,678,982 bp
GenBank #: CP074632
REBASE acronym: Sens29878
Org_num: 51491
All begin XM64_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 20385 | helix-turn-helix domain-containing protein | |||
| 20390 | M | M.Sens29945ORF20410P (100% identity) | M.Sens29878ORF20390P | |
| 20395 | S | S.Sens29945ORF20410P (100% identity) | S.Sens29878ORF20390P | |
| 20400 | AAA family ATPase | |||
| 20405 | R | Sens29945ORF20410P (100% identity) | Sens29878ORF20390P | |
| 20410 | helix-turn-helix domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1685 | cell division protein DamX | |||
| 1690 | M | M.StyTDamP (100% identity) | GATC | M.Sens29878DamP |
| 1695 | ribulose-phosphate 3-epimerase | |||
| 2175 | DUF2556 family protein | |||
| 2180 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sens29878ORF2180P |
| 2185 | DNA-binding transcriptional regulator Fis | |||
| 2920 | integrase arm-type DNA-binding domain-containing | |||
| 2925 | R | Sens29945ORF2940P (100% identity) | Sens29878ORF2935P | |
| 2930 | AAA family ATPase | |||
| 2935 | M | M.Sens29945ORF2940P (100% identity) | M.Sens29878ORF2935P | |
| 2940 | AAA family ATPase | |||
| 3015 | DNA helicase | |||
| 3020 | M | M.Sens661ORF19605P (100% identity) | M.Sens29878ORF3020P | |
| 3025 | R | Sens29945ORF3025P (100% identity) | Sens29878ORF3020P | |
| 3030 | DeoR family transcriptional regulator | |||
| 7955 | 82 aa hypothetical protein | |||
| 7960 | M | M.Sens29945ORF7970P (100% identity) | M.Sens29878ORF7960P | |
| 7965 | class I SAM-dependent methyltransferase | |||
| 7960 | adenine methylase | |||
| 7965 | M | M.Sens29945ORF7975P (100% identity) | M1.Sens29878ORF7965P | |
| 7970 | M | M.Sens29945ORF7980P (100% identity) | M2.Sens29878ORF7965P | |
| 7975 | 112 aa hypothetical protein | |||
| 9045 | PerC family transcriptional regulator | |||
| 9050 | M | M.Sens29945ORF9060P (100% identity) | M.Sens29878ORF9050P | |
| 9055 | RusA family crossover junction | |||
| 12855 | 77 aa hypothetical protein | |||
| 12860 | M | M.Sens29945ORF12870P (100% identity) | M.Sens29878ORF12860P | |
| 12865 | DUF1187 family protein | |||
| 13465 | drug/metabolite exporter YedA | |||
| 13470 | V | V.StyUK1DcmP (100% identity) | V.Sens29878DcmP | |
| 13475 | M | M.Sens29945DcmP (100% identity) | CCWGG | M.Sens29878DcmP |
| 13480 | phosphohydrolase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5070 | MFS transporter | |||
| 5075 | M | M.Sens29945ORF5080P (100% identity) | CAGAG | M.Sens29878ORF5075P |
| 5080 | R | Sens29945ORF5080P (100% identity) | CAGAG | Sens29878ORF5075P |
| 5085 | 33 aa hypothetical protein | |||