Ralstonia solanacearum RS24 |
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Putative Ralstonia solanacearum RS24 RM systems
Ref: She,X. and He,Z. unpublished
REBASE ref # 26087
| Sequence length: | GenBank #: | |
| Chromosome: | 3,908,757 bp | CP076120 |
| plasmid megaplasmid: | 2,077,399 bp | CP076122 |
REBASE acronym: RsoRS24
Org_num: 51398
All begin KM864_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 210 | Rrf2 family transcriptional regulator | |||
| 215 | M | M.RsoX05ORF971P (100% identity) | M.RsoRS24ORF215P | |
| 220 | 284 aa hypothetical protein | |||
| 225 | R | RsoWR1ORFKP (88% identity) | RsoRS24ORF215P | |
| 230 | sensor histidine kinase N-terminal | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 25 | IS3 family transposase | |||
| 30 | M | M.RsoUW763ORF40P (94% identity) | M.RsoRS24ORF30P | |
| 35 | R | RsoUW763ORF40P (100% identity) | RsoRS24ORF30P | |
| 40 | 208 aa hypothetical protein | |||
| 45 | V | V.RsoOE11ORF25595P (100% identity) | V.RsoRS24ORF30P | |
| 50 | 86 aa hypothetical protein | |||
| 1065 | 71 aa hypothetical protein | |||
| 1070 | M | M1.RsoRSNORF1245P (100% identity) | M1.RsoRS24ORF1070P | |
| 1075 | M | M2.RsoYC40ORF234P (100% identity) | M2.RsoRS24ORF1070P | |
| 1080 | 121 aa hypothetical protein | |||
| 1180 | type III secretion system YopJ family effector | |||
| 1185 | M | M.RsoOE11ORF24340P (100% identity) | M.RsoRS24ORF1185P | |
| 1190 | tape measure protein | |||
| 5135 | 122 aa hypothetical protein | |||
| ??? | M | M.RsoOE11ORF20435P (100% identity) | M.RsoRS24ORF5140P | |
| 5155 | phage tail protein | |||
| 7725 | tryptophan synthase subunit beta | |||
| 7730 | M | M.Rsp650ORF7450P (100% identity) | GTWWAC | M.RsoRS24I |
| 7735 | tryptophan synthase subunit alpha | |||
| 13085 | phospholipase D family protein | |||
| 13090 | M | M.Rsp650ORF13560P (100% identity) | M.RsoRS24ORF13090P | |
| 13095 | H-NS histone family protein | |||
| 13210 | DUF86 domain-containing protein | |||
| 13215 | M | M2.Rsp647ORF4655P (100% identity) | M1.RsoRS24ORF13215P | |
| 13220 | M | M2.Rsp650ORF13700P (100% identity) | M2.RsoRS24ORF13215P | |
| 13225 | 135 aa hypothetical protein | |||
| 17325 | 936 aa hypothetical protein | |||
| 17330 | M | M.RsoOE11ORF8625P (94% identity) | M.RsoRS24ORF17330P | |
| 17335 | H-NS histone family protein | |||
| plasmid megaplasmid | ||||
| 26450 | 135 aa hypothetical protein | |||
| 26455 | M | M1.RsoT02ORFKP (86% identity) | M1.RsoRS24ORF26455P | |
| 26460 | M | M1.RsoRS10ORF23820P (100% identity) | M2.RsoRS24ORF26455P | |
| 26465 | type III effector | |||
| 26560 | phosphoadenosine phosphosulfate reductase family | |||
| 26565 | M | M.RsoT02ORFHP (69% identity) | M.RsoRS24ORF26565P | |
| 26570 | phospholipase D family protein | |||
| 26790 | mannose-binding lectin protein | |||
| ??? | M | M.Rso45ORF19640P (100% identity) | M.RsoRS24ORF26795P | |
| 26805 | IS3 family transposase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 105 | 85 aa hypothetical protein | |||
| 110 | R | RsoYC40MrrP (92% identity) | RsoRS24MrrP | |
| 115 | PLP-dependent transferase | |||