Vibrio cholerae IDH-02387 |
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Putative Vibrio cholerae IDH-02387 RM systems
Ref: Ochi,K. et al. mSphere (2021) In press
REBASE ref # 33022
| Sequence length: | GenBank #: | |
| chromosome 1: | 3,117,466 bp | AP024551 |
| chromosome 2: | 1,045,501 bp | AP024552 |
REBASE acronym: Vch2387
Org_num: 51887
All begin
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| ??? | M | M.VchSXTORFAP (100% identity) | M.Vch2387ORFAP | |
| ??? | S | S.VchSXTORFAP (100% identity) | S.Vch2387ORFAP | |
| ??? | R | VchSXTORFAP (100% identity) | Vch2387ORFAP | |
| ??? | R | VspNIH41ORF1746P (99% identity) | AAGNNNNNNCATC | Vch2387ORFGP |
| ??? | S | S.VspNIH41ORF1746P (100% identity) | AAGNNNNNNCATC | S.Vch2387ORFGP |
| ??? | M | M.VspNIH41ORF1746P (100% identity) | AAGNNNNNNCATC | M.Vch2387ORFGP |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| ??? | R | SxiVS1ORF32030P (100% identity) | Vch2387ORFEP | |
| ??? | M | M.VspNIH41DamP (100% identity) | GATC | M.Vch2387ORFBP |
| chromosome 2 | ||||
| ??? | M | M.VspNIH41ORF3529P (100% identity) | M.Vch2387ORFCP | |
| ??? | R | VchsMO10ORF14720P (100% identity) | RCCGGY | Vch2387ORFDP |
| ??? | M | M.VspNIH41ORF700P (100% identity) | RCCGGY | M.Vch2387ORFDP |
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| ??? | R | VchSXTMcrBP (100% identity) | Vch2387McrBP | |
| ??? | R | VchSXTMcrCP (100% identity) | Vch2387McrCP | |
| ??? | R | VchsMO10ORF9915P (100% identity) | Vch2387ORFFP | |