Salmonella enterica subsp. enterica serovar 4,[5],12:i:- L-4596 |
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Putative Salmonella enterica subsp. enterica serovar 4,[5],12:i:- L-4596 RM systems
Ref: Sekizuka,T. et al. unpublished
REBASE ref # 32950
| Sequence length: | GenBank #: | |
| Chromosome: | 4,915,174 bp | AP023311 |
| plasmid pSAL4596-1: | 230,500 bp | AP023312 |
REBASE acronym: Sen4596
Org_num: 51571
All begin SEL4596_, SEL4596_P
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 38570 | restriction endonuclease | |||
| 38580 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen4596ORF38590P |
| 38590 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen4596ORF38590P |
| 38600 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen4596ORF38590P |
| 38610 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3550 | cell division protein DamX | |||
| 3560 | M | M.StyTDamP (100% identity) | GATC | M.Sen4596DamP |
| 3570 | ribulose-phosphate 3-epimerase | |||
| 4480 | 54 aa hypothetical protein | |||
| 4490 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen4596ORF4490P |
| 4500 | DNA-binding protein Fis | |||
| 10570 | IS6 family transposase | |||
| 10580 | M | M.Ssp17155ORFGP (100% identity) | M.Sen4596ORF10580P | |
| 10590 | nuclease | |||
| 11730 | 174 aa hypothetical protein | |||
| 11740 | M | M.StyTORF1914P (100% identity) | M.Sen4596ORF11740P | |
| 11750 | 70 aa hypothetical protein | |||
| 18080 | 157 aa hypothetical protein | |||
| ??? | M | M.SenceORFKP (100% identity) | M.Sen4596ORF18090P | |
| 18100 | crossover junction endodeoxyribonuclease rusA | |||
| 18540 | phosphohydrolase | |||
| 18550 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen4596DcmP |
| 18560 | V | V.StyUK1DcmP (100% identity) | V.Sen4596DcmP | |
| 18570 | drug/metabolite exporter YedA | |||
| 38900 | 1213 aa hypothetical protein | |||
| 38910 | RM | StyUK1IV (100% identity) | GATCAG | Sen4596ORF38910P |
| 38920 | 363 aa hypothetical protein | |||
| plasmid pSAL4596-1 | ||||
| 880 | 55 aa hypothetical protein | |||
| 890 | M | M.StyCORF187P (100% identity) | M.Sen4596ORF890P | |
| 900 | nuclease | |||
| 2530 | DNA-binding protein | |||
| 2540 | M | M.Ype21801ORF197P (100% identity) | M.Sen4596ORF2540P | |
| 2550 | 273 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 34130 | 33 aa hypothetical protein | |||
| 34140 | R | StyUK1IP (99% identity) | CAGAG | Sen4596ORF34150P |
| 34150 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen4596ORF34150P |
| 34160 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 38560 | membrane protein | |||
| 38570 | R | StyUK1MrrP (100% identity) | Sen4596MrrP | |
| 38580 | type I restriction-modification system | |||