Vibrio alfacsensis 04Ya249 |
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Putative Vibrio alfacsensis 04Ya249 RM systems
Ref: Yano,H. et al. unpublished
REBASE ref # 32495
| Sequence length: | GenBank #: | |
| chromosome 1: | 3,190,762 bp | AP019849 |
| chromosome 2: | 1,653,072 bp | AP019850 |
| plasmid pSEA2: | 306,247 bp | AP019851 |
REBASE acronym: Val249
Org_num: 49786
All begin VA249_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 21330 | 84 aa hypothetical protein | |||
| 21340 | R | VhaBBORF1115BP (86% identity) | Val249ORF21360P | |
| 21350 | S | S.Spr94ORF7550P (50% identity) | S.Val249ORF21360P | |
| 21360 | M | M.VhaBBORF1115P (71% identity) | M.Val249ORF21360P | |
| 21370 | 130 aa hypothetical protein | |||
| 21410 | 208 aa hypothetical protein | |||
| 21420 | M | M.Vpe15642ORFIP (100% identity) | M.Val249ORF21420P | |
| 21430 | S | S.Vpe15642ORFIP (100% identity) | S.Val249ORF21420P | |
| 21440 | R | Mmo365IIIP (97% identity) | Val249ORF21420P | |
| 21450 | metal-dependent hydrolase | |||
| chromosome 2 | ||||
| 32690 | 240 aa hypothetical protein | |||
| 32700 | M | M.Vha106ORF12720P (97% identity) | M.Val249ORF32700P | |
| 32710 | S | S.NpeLFT18ORFEP (43% identity) | S.Val249ORF32700P | |
| 32720 | R | Vha106ORF12720P (96% identity) | Val249ORF32700P | |
| 34040 | 130 aa hypothetical protein | |||
| 34050 | M | M.Vpa19500ORFAP (98% identity) | M.Val249ORF34050P | |
| 34060 | S | S.Vhaf10ORFCP (65% identity) | S.Val249ORF34050P | |
| 34070 | 445 aa hypothetical protein | |||
| 34080 | 211 aa hypothetical protein | |||
| 34090 | 228 aa hypothetical protein | |||
| 34100 | 364 aa hypothetical protein | |||
| ??? | R | VpaX1ORF12705P (95% identity) | Val249ORF34050P | |
| 34130 | metal-dependent hydrolase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 2740 | cell division protein DamX | |||
| 2750 | M | M.ValVA1DamP (100% identity) | GATC | M.Val249DamP |
| 2760 | ribulose-phosphate 3-epimerase | |||
| 21530 | 159 aa hypothetical protein | |||
| 21540 | R | Val108ORF5740P (99% identity) | Val249ORF21560P | |
| 21550 | 162 aa hypothetical protein | |||
| 21560 | M | M.ValVA1ORF2880P (99% identity) | M.Val249ORF21560P | |
| 21570 | 127 aa hypothetical protein | |||
| plasmid pSEA2 | ||||
| 43210 | ATP-dependent helicase YeeB | |||
| 43220 | RM | Vsp108ORFAP (100% identity) | Val249ORF43220P | |
| 43230 | 110 aa hypothetical protein | |||
| 43400 | 595 aa hypothetical protein | |||
| 43410 | M | M.Vsp108ORFBP (100% identity) | M.Val249ORF43410P | |
| 43420 | 90 aa hypothetical protein | |||
| 44890 | 111 aa hypothetical protein | |||
| ??? | M | M.Val108ORF42060P (100% identity) | M.Val249ORF44900P | |
| 44910 | 80 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 9670 | 891 aa hypothetical protein | |||
| 9680 | R | Val108ORF17350P (94% identity) | Val249ORF9680P | |
| 9690 | SAM-dependent methyltransferase | |||