Dickeya dianthicola 16LI02 |
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Putative Dickeya dianthicola 16LI02 RM systems
Ref: Ge,T. unpublished
REBASE ref # 32309
Complete sequence: 4,909,059 bp
GenBank #: CP069602
REBASE acronym: DdiLI02
Org_num: 48854
All begin JRZ85_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3270 | 124 aa hypothetical protein | |||
| 3275 | S | S2.DdiPA24ORF3290P (100% identity) | S2.DdiLI02ORF3285P | |
| 3280 | S | S1.DdiPA24ORF3290P (100% identity) | S1.DdiLI02ORF3285P | |
| 3285 | M | M.DdiPA24ORF3290P (100% identity) | M.DdiLI02ORF3285P | |
| 3290 | R | DdiPA24ORF3290P (100% identity) | DdiLI02ORF3285P | |
| 3295 | ribosomal protein S18-alanine | |||
| 4585 | M48 family metallopeptidase | |||
| 4590 | R | DdiPA24ORF4615P (100% identity) | DdiLI02ORF4615P | |
| 4595 | macro domain-containing protein | |||
| 4600 | DUF4433 domain-containing protein | |||
| 4605 | DUF4433 domain-containing protein | |||
| 4610 | S | S.DdiPA24ORF4615P (100% identity) | S.DdiLI02ORF4615P | |
| 4615 | M | M.DdiPA24ORF4615P (100% identity) | M.DdiLI02ORF4615P | |
| 4620 | transcription factor | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2180 | amino acid transporter | |||
| 2185 | V | V.DdiPA24ORF2190P (100% identity) | V.DdiLI02ORF2190P | |
| ??? | M | M.DdiPA24ORF2190P (100% identity) | M.DdiLI02ORF2190P | |
| 2195 | R | DdiPA24ORF2190P (100% identity) | DdiLI02ORF2190P | |
| 2200 | MFS transporter | |||
| 3930 | 76 aa hypothetical protein | |||
| 3935 | M | M.DdiPA24ORF3940P (100% identity) | M.DdiLI02ORF3935P | |
| 3940 | DNA cytosine methyltransferase | |||
| 3935 | Dam family site-specific | |||
| 3940 | M | M.DdiPA24ORF3945P (100% identity) | M.DdiLI02ORF3940P | |
| 3945 | replication endonuclease | |||
| 3945 | replication endonuclease | |||
| 3950 | R | DdiPA24ORF3960P (100% identity) | DdiLI02ORF3955P | |
| 3955 | M | M.DdiPA24ORF3960P (100% identity) | TGGCCA | M.DdiLI02ORF3955P |
| 3960 | 51 aa hypothetical protein | |||
| 7325 | 857 aa hypothetical protein | |||
| 7330 | M | M.DdiPA24ORF7340P (100% identity) | M.DdiLI02ORF7330P | |
| 7335 | DUF1738 domain-containing protein | |||
| 7765 | phosphonate metabolism protein PhnP | |||
| 7770 | R | DdiPA24ORF7785P (100% identity) | DdiLI02ORF7775P | |
| 7775 | M | M.DdiPA24ORF7785P (100% identity) | M.DdiLI02ORF7775P | |
| 7780 | phosphonate ABC transporter ATP-binding protein | |||
| 15930 | type II secretion system pilot lipoprotein GspS | |||
| 15935 | R | DdiPA24ORF15945P (100% identity) | DdiLI02ORF15940P | |
| 15940 | M | M.DdiPA24ORF15945P (100% identity) | M.DdiLI02ORF15940P | |
| 15945 | recombinase family protein | |||
| 16195 | 222 aa hypothetical protein | |||
| 16200 | M | M.DdiPA24ORF16205P (100% identity) | M.DdiLI02ORF16200P | |
| 16205 | 67 aa hypothetical protein | |||
| 20280 | ribulose-phosphate 3-epimerase | |||
| 20285 | M | M.Dsp2401ORFJP (100% identity) | GATC | M.DdiLI02DamP |
| 20290 | SPOR domain-containing protein | |||