Salmonella enterica subsp. enterica serovar Newport CFSAN024417 |
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Putative Salmonella enterica subsp. enterica serovar Newport CFSAN024417 RM systems
Ref: Hoffmann,M. et al. unpublished
REBASE ref # 32354
Complete sequence: 4,808,480 bp
GenBank #: CP074334
REBASE acronym: Sen24417
Org_num: 49040
All begin JYM83_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 19445 | 322 aa hypothetical protein | |||
| 19450 | R | Spy5740IP (100% identity) | GTANNNNNNNNGTTC | Sen24417ORF19455P |
| 19455 | M | M.Sen24415ORF19980P (100% identity) | GTANNNNNNNNGTTC | M.Sen24417ORF19455P |
| 19460 | S | S.Sens661ORF19445P (100% identity) | GTANNNNNNNNGTTC | S.Sen24417ORF19455P |
| 19465 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1740 | cell division protein DamX | |||
| 1745 | M | M.StyTDamP (100% identity) | GATC | M.Sen24417DamP |
| 1750 | ribulose-phosphate 3-epimerase | |||
| 2230 | DUF2556 family protein | |||
| 2235 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen24417ORF2235P |
| 2240 | DNA-binding transcriptional regulator Fis | |||
| 3140 | DUF3850 domain-containing protein | |||
| 3145 | M | M.SenS2085ORF19550P (100% identity) | M.Sen24417ORF3145P | |
| 3150 | replication endonuclease | |||
| 8875 | phosphohydrolase | |||
| 8880 | M | M.Sen24415DcmP (100% identity) | CCWGG | M.Sen24417DcmP |
| 8885 | V | V.StyUK1DcmP (100% identity) | V.Sen24417DcmP | |
| 8890 | drug/metabolite exporter YedA | |||
| 13725 | 112 aa hypothetical protein | |||
| 13730 | M | M.Sens29945ORF7970P (100% identity) | M.Sen24417ORF13730P | |
| 13735 | 82 aa hypothetical protein | |||
| 19585 | YebC/PmpR family DNA-binding transcriptional | |||
| 19590 | R | SenXORF20240P (100% identity) | Sen24417ORF19590P | |
| 19600 | ParA family protein | |||
| 19800 | Crp/Fnr family transcriptional regulator | |||
| 19805 | M | M.Sen24415ORF20330P (100% identity) | M.Sen24417ORF19805P | |
| 19810 | R | Sen24415ORF20330P (100% identity) | Sen24417ORF19805P | |
| 19815 | anaerobic sulfatase maturase | |||
| 19875 | HNH endonuclease | |||
| 19880 | M | M.Sen24415DndEP (100% identity) | M.Sen24417DndEP | |
| 19885 | DNA sulfur modification protein DndD | |||
| 19880 | DNA sulfur modification protein DndE | |||
| 19885 | M | M.Sen24415DndDP (99% identity) | M.Sen24417DndDP | |
| 19890 | DNA phosphorothioation system sulfurtransferase | |||
| 19885 | DNA sulfur modification protein DndD | |||
| 19890 | M | M.Sen24415DndCP (100% identity) | M.Sen24417DndCP | |
| 19895 | DNA sulfur modification protein DndB | |||
| 19890 | DNA phosphorothioation system sulfurtransferase | |||
| 19895 | M | M.Sen24415DndBP (100% identity) | M.Sen24417DndBP | |
| 19900 | cysteine desulfurase DndA | |||
| 19895 | DNA sulfur modification protein DndB | |||
| 19900 | M | M.Sen24415DndAP (100% identity) | M.Sen24417DndAP | |
| 19905 | DGQHR domain-containing protein | |||
| 21250 | LexA family transcriptional regulator | |||
| 21255 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Sen24417ORF21255P |
| 21260 | 330 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17265 | 33 aa hypothetical protein | |||
| 17270 | R | SenNCTR361ORF2010P (100% identity) | CAGAG | Sen24417ORF17275P |
| 17275 | M | M.SenZYXORFDP (100% identity) | CAGAG | M.Sen24417ORF17275P |
| 17280 | MFS transporter | |||