Salmonella enterica subsp. enterica serovar Newport CFSAN024415 |
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Putative Salmonella enterica subsp. enterica serovar Newport CFSAN024415 RM systems
Ref: Hoffmann,M. et al. unpublished
REBASE ref # 32354
| Sequence length: | GenBank #: | |
| Chromosome: | 4,878,017 bp | CP074335 |
| plasmid pCFSAN024415: | 210,959 bp | CP074336 |
REBASE acronym: Sen24415
Org_num: 49039
All begin JYN45_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19970 | 322 aa hypothetical protein | |||
| 19975 | R | Spy5740IP (100% identity) | GTANNNNNNNNGTTC | Sen24415ORF19980P |
| 19980 | M | M.Sen24417ORF19455P (100% identity) | GTANNNNNNNNGTTC | M.Sen24415ORF19980P |
| 19985 | S | S.Sens661ORF19445P (100% identity) | GTANNNNNNNNGTTC | S.Sen24415ORF19980P |
| 19990 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1735 | cell division protein DamX | |||
| 1740 | M | M.StyTDamP (100% identity) | GATC | M.Sen24415DamP |
| 1745 | ribulose-phosphate 3-epimerase | |||
| 2225 | DUF2556 family protein | |||
| 2230 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen24415ORF2230P |
| 2235 | DNA-binding transcriptional regulator Fis | |||
| 5390 | DUF3850 domain-containing protein | |||
| 5395 | M | M.Sen8271ORF1499P (99% identity) | M.Sen24415ORF5395P | |
| 5400 | phosphoadenosine phosphosulfate reductase family | |||
| 9145 | PerC family transcriptional regulator | |||
| ??? | M | M.SspSAL045ORF8900P (100% identity) | M.Sen24415ORF9150P | |
| 9155 | RusA family crossover junction | |||
| 9370 | phosphohydrolase | |||
| 9375 | M | M.Sen24417DcmP (100% identity) | CCWGG | M.Sen24415DcmP |
| 9380 | V | V.StyUK1DcmP (100% identity) | V.Sen24415DcmP | |
| 9385 | drug/metabolite exporter YedA | |||
| 15500 | protein ninF | |||
| 15505 | M | M.SenS3ORF17433P (99% identity) | M.Sen24415ORF15505P | |
| 15510 | NinE family protein | |||
| 20110 | YebC/PmpR family DNA-binding transcriptional | |||
| 20115 | R | SenXORF20240P (100% identity) | Sen24415ORF20115P | |
| 20125 | ParA family protein | |||
| 20325 | Crp/Fnr family transcriptional regulator | |||
| 20330 | M | M.Sen24417ORF19805P (100% identity) | M.Sen24415ORF20330P | |
| 20335 | R | Sen24417ORF19805P (100% identity) | Sen24415ORF20330P | |
| 20340 | anaerobic sulfatase maturase | |||
| 20405 | HNH endonuclease | |||
| 20410 | M | M.Sen24417DndEP (100% identity) | M.Sen24415DndEP | |
| 20415 | DNA sulfur modification protein DndD | |||
| 20410 | DNA sulfur modification protein DndE | |||
| 20415 | M | M.Sen24417DndDP (99% identity) | M.Sen24415DndDP | |
| 20420 | DNA phosphorothioation system sulfurtransferase | |||
| 20415 | DNA sulfur modification protein DndD | |||
| 20420 | M | M.Sen24417DndCP (100% identity) | M.Sen24415DndCP | |
| 20425 | DNA sulfur modification protein DndB | |||
| 20420 | DNA phosphorothioation system sulfurtransferase | |||
| 20425 | M | M.Sen24417DndBP (100% identity) | M.Sen24415DndBP | |
| 20430 | cysteine desulfurase DndA | |||
| 20425 | DNA sulfur modification protein DndB | |||
| 20430 | M | M.Sen24417DndAP (100% identity) | M.Sen24415DndAP | |
| 20435 | DGQHR domain-containing protein | |||
| 22645 | phage portal protein | |||
| 22650 | R | R1.SenXB08ORF22340P (100% identity) | R1.Sen24415ORF22660P | |
| 22655 | R | SspS13ORF1655P (100% identity) | R2.Sen24415ORF22660P | |
| 22660 | M | M.SspS13ORF1655P (100% identity) | M.Sen24415ORF22660P | |
| 22665 | replication endonuclease | |||
| plasmid pCFSAN024415 | ||||
| 23790 | 143 aa hypothetical protein | |||
| 23795 | M | M.Vch11614ORFCP (100% identity) | M.Sen24415ORF23795P | |
| 23800 | 120 aa hypothetical protein | |||
| 24390 | 143 aa hypothetical protein | |||
| 24395 | M | M.SenTFORF24805P (100% identity) | M.Sen24415ORF24395P | |
| 24400 | 100 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17785 | 33 aa hypothetical protein | |||
| 17790 | R | SenNCTR361ORF2010P (100% identity) | CAGAG | Sen24415ORF17795P |
| 17795 | M | M.SenZYXORFDP (100% identity) | CAGAG | M.Sen24415ORF17795P |
| 17800 | MFS transporter | |||