Salmonella enterica subsp. enterica serovar Javiana CFSAN001992 |
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Putative Salmonella enterica subsp. enterica serovar Javiana CFSAN001992 RM systems
Ref: Hoffmann,M. et al. unpublished
REBASE ref # 32354
Complete sequence: 4,679,849 bp
GenBank #: CP074314
REBASE acronym: Sen1992
Org_num: 49019
All begin JYN10_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 19335 | restriction endonuclease | |||
| 19340 | M | M.StySBLI (100% identity) | GGYANNNNNNTCG | M.Sen1992ORF19340P |
| 19345 | S | S.StySBLI (100% identity) | GGYANNNNNNTCG | S.Sen1992ORF19340P |
| 19350 | R | StySBLI (100% identity) | GGYANNNNNNTCG | Sen1992ORF19340P |
| 19355 | DUF91 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1775 | cell division protein DamX | |||
| 1780 | M | M.StyTDamP (100% identity) | GATC | M.Sen1992DamP |
| 1785 | ribulose-phosphate 3-epimerase | |||
| 2265 | DUF2556 family protein | |||
| 2270 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen1992ORF2270P |
| 2275 | DNA-binding transcriptional regulator Fis | |||
| 5450 | TraR/DksA family transcriptional regulator | |||
| 5455 | M | M.SspA39ORFGP (100% identity) | GATC | M.Sen1992ORF5455P |
| 5460 | replication endonuclease | |||
| 13710 | drug/metabolite exporter YedA | |||
| 13715 | V | V.StyUK1DcmP (100% identity) | V.Sen1992DcmP | |
| 13720 | M | M.SspZ69DcmP (100% identity) | CCWGG | M.Sen1992DcmP |
| 13725 | phosphohydrolase | |||
| 19465 | YebC/PmpR family DNA-binding transcriptional | |||
| 19470 | R | SspSAL045ORF19515P (100% identity) | Sen1992ORF19470P | |
| 19475 | IS3 family transposase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17235 | 33 aa hypothetical protein | |||
| 17240 | R | SspSAL045ORF17295P (100% identity) | CAGAG | Sen1992ORF17245P |
| 17245 | M | M.SspSAL045ORF17295P (100% identity) | CAGAG | M.Sen1992ORF17245P |
| 17250 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19330 | N-6 DNA methylase | |||
| 19335 | R | Ssp3CMrrP (100% identity) | Sen1992MrrP | |
| 19340 | type I restriction-modification system subunit | |||