Salmonella enterica subsp. enterica serovar Derby 626 |
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Putative Salmonella enterica subsp. enterica serovar Derby 626 RM systems
Ref: Hoffmann,M. et al. unpublished
REBASE ref # 32354
| Sequence length: | GenBank #: | |
| Chromosome: | 4,779,489 bp | CP074319 |
| plasmid pCFSAN001315: | 94,694 bp | CP074320 |
REBASE acronym: Sen626
Org_num: 49002
All begin JYM74_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19420 | 322 aa hypothetical protein | |||
| 19425 | R | SensTJX21ORF11885P (100% identity) | TACNNNNNNNGTTC | Sen626ORF19430P |
| 19430 | M | M.SensTJX21ORF11885P (100% identity) | TACNNNNNNNGTTC | M.Sen626ORF19430P |
| 19435 | S | S.SensTJX21ORF11885P (100% identity) | TACNNNNNNNGTTC | S.Sen626ORF19430P |
| 19440 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1715 | cell division protein DamX | |||
| 1720 | M | M.StyTDamP (100% identity) | GATC | M.Sen626DamP |
| 1725 | ribulose-phosphate 3-epimerase | |||
| 2210 | DUF2556 family protein | |||
| 2215 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen626ORF2215P |
| 2220 | DNA-binding transcriptional regulator Fis | |||
| 5325 | tyrosine-type recombinase/integrase | |||
| 5330 | M | M.SenWT281ORF6055P (100% identity) | M.Sen626ORF5330P | |
| 5335 | AAA family ATPase | |||
| 5400 | PerC family transcriptional regulator | |||
| 5405 | M | M.Sen164045ORF10280P (99% identity) | M.Sen626ORF5405P | |
| 5410 | RusA family crossover junction | |||
| 9645 | Eaa protein | |||
| 9650 | M | M.SenSH7ORF6615P (100% identity) | M.Sen626ORF9650P | |
| 9655 | ead/Ea22-like family protein | |||
| 9710 | PerC family transcriptional regulator | |||
| 9715 | M | M.SenS16ORF9325P (100% identity) | M.Sen626ORF9715P | |
| 9720 | RusA family crossover junction | |||
| 13825 | drug/metabolite exporter YedA | |||
| 13830 | V | V.StyUK1DcmP (100% identity) | V.Sen626DcmP | |
| 13835 | M | M.SensTJX21DcmP (100% identity) | CCWGG | M.Sen626DcmP |
| 13840 | phosphohydrolase | |||
| 19565 | YebC/PmpR family DNA-binding transcriptional | |||
| 19570 | R | SensTJX21ORF12025P (100% identity) | Sen626ORF19570P | |
| 19575 | fosfomycin resistance glutathione transferase | |||
| 19595 | RM | SensTJX21ORF12050P (100% identity) | Sen626ORF19595P | |
| 19600 | DEAD/DEAH box helicase | |||
| plasmid pCFSAN001315 | ||||
| 23195 | 73 aa hypothetical protein | |||
| 23200 | M | M.Sfl60ORF25670P (100% identity) | SAY | M.Sen626ORF23200P |
| 23205 | 103 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17215 | 33 aa hypothetical protein | |||
| 17220 | R | StyUK1IP (99% identity) | CAGAG | Sen626ORF17225P |
| 17225 | M | M.SensTJX21ORF9690P (100% identity) | CAGAG | M.Sen626ORF17225P |
| 17230 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19600 | DEAD/DEAH box helicase | |||
| 19605 | R | SensTJX21ORF12060P (100% identity) | Sen626ORF19605P | |
| 19610 | 104 aa hypothetical protein | |||