Salmonella enterica subsp. enterica CFSAN004085 |
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Putative Salmonella enterica subsp. enterica CFSAN004085 RM systems
Ref: Hoffmann,M. et al. unpublished
REBASE ref # 32354
Complete sequence: 4,745,689 bp
GenBank #: CP074310
REBASE acronym: Sen4085
Org_num: 48979
All begin JYN40_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3835 | endoribonuclease SymE | |||
| 3840 | S | S.SensIBG7b4ORF19375P (100% identity) | GAGNNNNNNNRTCC | S.Sen4085ORF3845P |
| 3845 | M | M.Ssp6947I (100% identity) | GAGNNNNNNNRTCC | M.Sen4085ORF3845P |
| 3850 | R | Sen22543ORF19510P (100% identity) | GAGNNNNNNNRTCC | Sen4085ORF3845P |
| 3855 | 322 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3655 | integrase arm-type DNA-binding domain-containing | |||
| 3660 | R | SenS25DptFP (100% identity) | Sen4085DptFP | |
| 3665 | DNA phosphorothioation-dependent restriction | |||
| 3660 | DNA phosphorothioation-dependent restriction | |||
| 3665 | R | SspZ69DptGP (100% identity) | Sen4085DptGP | |
| 3670 | DNA phosphorothioation-dependent restriction | |||
| 3665 | DNA phosphorothioation-dependent restriction | |||
| 3670 | R | SenS25DptHP (100% identity) | Sen4085DptHP | |
| 3675 | DUF262 domain-containing protein | |||
| 3675 | DUF262 domain-containing protein | |||
| 3680 | M | M.SspZ69DndEP (100% identity) | M.Sen4085DndEP | |
| 3685 | DNA sulfur modification protein DndD | |||
| 3680 | DNA sulfur modification protein DndE | |||
| 3685 | M | M.SenS0870DndDP (100% identity) | M.Sen4085DndDP | |
| 3690 | DNA phosphorothioation system sulfurtransferase | |||
| 3685 | DNA sulfur modification protein DndD | |||
| 3690 | M | M.SenS25DndCP (100% identity) | M.Sen4085DndCP | |
| 3695 | DNA sulfur modification protein DndB | |||
| 3690 | DNA phosphorothioation system sulfurtransferase | |||
| 3695 | M | M.SspZ69DndBP (100% identity) | M.Sen4085DndBP | |
| 3700 | malate transporter | |||
| 3700 | malate transporter | |||
| 3705 | R | SenS25ORF20520P (100% identity) | Sen4085ORF3705P | |
| 3710 | YebC/PmpR family DNA-binding transcriptional | |||
| 14065 | drug/metabolite exporter YedA | |||
| 14070 | V | V.StyUK1DcmP (100% identity) | V.Sen4085DcmP | |
| 14075 | M | M.Sen22543DcmP (100% identity) | CCWGG | M.Sen4085DcmP |
| 14080 | phosphohydrolase | |||
| 17685 | 60 aa hypothetical protein | |||
| 17690 | M | M.Sen432613ORF1924P (100% identity) | M.Sen4085ORF17690P | |
| 17695 | R | Sen432613ORF1924P (100% identity) | Sen4085ORF17690P | |
| 17700 | phage portal protein | |||
| 21055 | DNA-binding transcriptional regulator Fis | |||
| 21060 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen4085ORF21060P |
| 21065 | DUF2556 family protein | |||
| 21550 | ribulose-phosphate 3-epimerase | |||
| 21555 | M | M.StyTDamP (100% identity) | GATC | M.Sen4085DamP |
| 21560 | cell division protein DamX | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6025 | MFS transporter | |||
| 6030 | M | M.SspZ69ORF17325P (100% identity) | CAGAG | M.Sen4085ORF6030P |
| 6035 | R | SenS133ORF17655P (100% identity) | CAGAG | Sen4085ORF6030P |
| 6040 | 33 aa hypothetical protein | |||