Salmonella enterica subsp. enterica CFSAN004079 |
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Putative Salmonella enterica subsp. enterica CFSAN004079 RM systems
Ref: Hoffmann,M. et al. unpublished
REBASE ref # 32354
Complete sequence: 4,696,449 bp
GenBank #: CP074312
REBASE acronym: Sen4079
Org_num: 48978
All begin JYN03_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 19105 | restriction endonuclease | |||
| 19110 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen4079ORF19115P |
| 19115 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen4079ORF19115P |
| 19120 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen4079ORF19115P |
| 19125 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1780 | cell division protein DamX | |||
| 1785 | M | M.StyTDamP (100% identity) | GATC | M.Sen4079DamP |
| 1790 | ribulose-phosphate 3-epimerase | |||
| 2270 | DUF2556 family protein | |||
| 2275 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen4079ORF2275P |
| 2280 | DNA-binding transcriptional regulator Fis | |||
| 8750 | phosphohydrolase | |||
| 8755 | M | M.SenWDcmP (100% identity) | CCWGG | M.Sen4079DcmP |
| 8760 | V | V.StyUK1DcmP (100% identity) | V.Sen4079DcmP | |
| 8765 | drug/metabolite exporter YedA | |||
| 19245 | YebC/PmpR family DNA-binding transcriptional | |||
| 19250 | R | SenS25ORF20520P (100% identity) | Sen4079ORF19250P | |
| 19255 | malate transporter | |||
| 19255 | malate transporter | |||
| 19260 | M | M.SspZ69DndBP (100% identity) | M.Sen4079DndBP | |
| 19265 | DNA phosphorothioation system sulfurtransferase | |||
| 19260 | DNA sulfur modification protein DndB | |||
| 19265 | M | M.SenS25DndCP (100% identity) | M.Sen4079DndCP | |
| 19270 | DNA sulfur modification protein DndD | |||
| 19265 | DNA phosphorothioation system sulfurtransferase | |||
| 19270 | M | M.SenS25DndDP (100% identity) | M.Sen4079DndDP | |
| 19275 | DNA sulfur modification protein DndE | |||
| 19270 | DNA sulfur modification protein DndD | |||
| 19275 | M | M.SspZ69DndEP (100% identity) | M.Sen4079DndEP | |
| 19280 | DUF262 domain-containing protein | |||
| 19280 | DUF262 domain-containing protein | |||
| 19285 | R | SenS25DptHP (100% identity) | Sen4079DptHP | |
| 19290 | DNA phosphorothioation-dependent restriction | |||
| 19285 | DNA phosphorothioation-dependent restriction | |||
| 19290 | R | SspZ69DptGP (100% identity) | Sen4079DptGP | |
| 19295 | DNA phosphorothioation-dependent restriction | |||
| 19290 | DNA phosphorothioation-dependent restriction | |||
| 19295 | R | SenS25DptFP (100% identity) | Sen4079DptFP | |
| 19300 | integrase arm-type DNA-binding domain-containing | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 16850 | 33 aa hypothetical protein | |||
| 16855 | R | StyUK1IP (99% identity) | CAGAG | Sen4079ORF16860P |
| 16860 | M | M.SenWT7II (100% identity) | CAGAG | M.Sen4079ORF16860P |
| 16865 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19100 | BrnT family toxin | |||
| 19105 | R | StyUK1MrrP (100% identity) | Sen4079MrrP | |
| 19110 | type I restriction-modification system | |||