Salmonella enterica subsp. enterica CFSAN004090 |
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Putative Salmonella enterica subsp. enterica CFSAN004090 RM systems
Ref: Hoffmann,M. et al. unpublished
REBASE ref # 32354
Complete sequence: 4,730,083 bp
GenBank #: CP074309
REBASE acronym: Sen4090
Org_num: 48980
All begin JYM72_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 19195 | restriction endonuclease | |||
| 19200 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen4090ORF19205P |
| 19205 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen4090ORF19205P |
| 19210 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen4090ORF19205P |
| 19215 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1820 | cell division protein DamX | |||
| 1825 | M | M.StyTDamP (100% identity) | GATC | M.Sen4090DamP |
| 1830 | ribulose-phosphate 3-epimerase | |||
| 2310 | DUF2556 family protein | |||
| 2315 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen4090ORF2315P |
| 2320 | DNA-binding transcriptional regulator Fis | |||
| 8880 | phosphohydrolase | |||
| 8885 | M | M.SenWDcmP (100% identity) | CCWGG | M.Sen4090DcmP |
| 8890 | V | V.StyUK1DcmP (100% identity) | V.Sen4090DcmP | |
| 8895 | drug/metabolite exporter YedA | |||
| 19335 | YebC/PmpR family DNA-binding transcriptional | |||
| 19340 | R | SenS25ORF20520P (100% identity) | Sen4090ORF19340P | |
| 19345 | malate transporter | |||
| 19345 | malate transporter | |||
| 19350 | M | M.SspZ69DndBP (100% identity) | M.Sen4090DndBP | |
| 19355 | DNA phosphorothioation system sulfurtransferase | |||
| 19350 | DNA sulfur modification protein DndB | |||
| 19355 | M | M.SenS25DndCP (100% identity) | M.Sen4090DndCP | |
| 19360 | DNA sulfur modification protein DndD | |||
| 19355 | DNA phosphorothioation system sulfurtransferase | |||
| 19360 | M | M.SenS0870DndDP (100% identity) | M.Sen4090DndDP | |
| 19365 | DNA sulfur modification protein DndE | |||
| 19360 | DNA sulfur modification protein DndD | |||
| 19365 | M | M.SspZ69DndEP (100% identity) | M.Sen4090DndEP | |
| 19370 | DUF262 domain-containing protein | |||
| 19370 | DUF262 domain-containing protein | |||
| 19375 | R | SenS25DptHP (100% identity) | Sen4090DptHP | |
| 19380 | DNA phosphorothioation-dependent restriction | |||
| 19375 | DNA phosphorothioation-dependent restriction | |||
| 19380 | R | SspZ69DptGP (100% identity) | Sen4090DptGP | |
| 19385 | DNA phosphorothioation-dependent restriction | |||
| 19380 | DNA phosphorothioation-dependent restriction | |||
| 19385 | R | SenS25DptFP (100% identity) | Sen4090DptFP | |
| 19390 | integrase arm-type DNA-binding domain-containing | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 16985 | 33 aa hypothetical protein | |||
| 16990 | R | SenS133ORF17655P (100% identity) | CAGAG | Sen4090ORF16995P |
| 16995 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen4090ORF16995P |
| 17000 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19190 | BrnT family toxin | |||
| 19195 | R | StyUK1MrrP (100% identity) | Sen4090MrrP | |
| 19200 | type I restriction-modification system | |||