Salmonella enterica subsp. enterica serovar Give var. 15 CFSAN004343 |
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Putative Salmonella enterica subsp. enterica serovar Give var. 15 CFSAN004343 RM systems
Ref: Hoffmann,M. et al. unpublished
REBASE ref # 32354
Complete sequence: 4,717,552 bp
GenBank #: CP074305
REBASE acronym: Sen4343
Org_num: 12892
All begin JYM95_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1680 | cell division protein DamX | |||
| 1685 | M | M.StyTDamP (100% identity) | GATC | M.Sen4343DamP |
| 1690 | ribulose-phosphate 3-epimerase | |||
| 2170 | DUF2556 family protein | |||
| 2175 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen4343ORF24895P |
| 2180 | DNA-binding transcriptional regulator Fis | |||
| 5245 | TraR/DksA family transcriptional regulator | |||
| 5250 | M | M.SenS224ORF5510P (100% identity) | M.Sen4343ORF5250P | |
| 5255 | replication endonuclease | |||
| 6135 | 77 aa hypothetical protein | |||
| 6140 | M | M.SenM4441ORF6385P (100% identity) | M.Sen4343ORF6140P | |
| 6145 | Pyocin large subunit | |||
| 8845 | PerC family transcriptional regulator | |||
| 8850 | M | M.StyUK1V (100% identity) | GATC | M.Sen4343ORF8850P |
| 8855 | RusA family crossover junction | |||
| 9090 | phosphohydrolase | |||
| 9095 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen4343DcmP |
| 9100 | V | V.StyUK1DcmP (100% identity) | V.Sen4343DcmP | |
| 9105 | drug/metabolite exporter YedA | |||
| 12755 | NinE family protein | |||
| 12760 | M | M.Sens24230ORF16970P (100% identity) | GATC | M.Sen4343ORF12760P |
| 12765 | recombination protein NinB | |||
| 14325 | lysis protein | |||
| 14330 | M | M.Sens24230ORF14570P (100% identity) | M.Sen4343ORF14330P | |
| 14335 | lysozyme | |||
| 14375 | methyltransferase | |||
| 14380 | M | M.Sens29945ORF7970P (100% identity) | M.Sen4343ORF14380P | |
| 14385 | 82 aa hypothetical protein | |||
| 20205 | DeoR family transcriptional regulator | |||
| 20210 | R | Ssp918ORF19230P (100% identity) | Sen4343ORF20215P | |
| 20215 | M | M.Sens679ORF19185P (100% identity) | M.Sen4343ORF20215P | |
| 20220 | ATP-binding protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17640 | 33 aa hypothetical protein | |||
| 17645 | R | StyUK1IP (99% identity) | CAGAG | Sen4343ORF17650P |
| 17650 | M | M.Sens29958ORF17880P (100% identity) | CAGAG | M.Sen4343ORF17650P |
| 17655 | MFS transporter | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6085 | tyrosine-type recombinase/integrase | |||
| 6090 | M | M.Sen1333ORF11730P (100% identity) | M.Sen4343ORF6090P | |
| 6095 | DUF1317 family protein | |||