Salmonella enterica subsp. enterica serovar Sandiego CFSAN024590 |
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Putative Salmonella enterica subsp. enterica serovar Sandiego CFSAN024590 RM systems
Ref: Hoffmann,M. et al. unpublished
REBASE ref # 32354
| Sequence length: | GenBank #: | |
| Chromosome: | 4,553,496 bp | CP074265 |
| plasmid pCFSAN024590: | 263,246 bp | CP074266 |
REBASE acronym: Sen24590
Org_num: 49062
All begin JYM69_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18795 | malate transporter | |||
| 18800 | R | SenR3019ORFDP (100% identity) | CCANNNNNGRTG | Sen24590ORF18805P |
| 18805 | M | M.SenR3019ORFDP (100% identity) | CCANNNNNGRTG | M.Sen24590ORF18805P |
| 18810 | S | S.Sen74111ORF19105P (100% identity) | CCANNNNNGRTG | S.Sen24590ORF18805P |
| 18815 | 5-nucleotidase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1760 | cell division protein DamX | |||
| 1765 | M | M.StyTDamP (100% identity) | GATC | M.Sen24590DamP |
| 1770 | ribulose-phosphate 3-epimerase | |||
| 2255 | DUF2556 family protein | |||
| 2260 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen24590ORF2260P |
| 2265 | DNA-binding transcriptional regulator Fis | |||
| 4610 | L-fucose isomerase | |||
| 4615 | M | M.Sen37978ORF9219P (96% identity) | M.Sen24590ORF4615P | |
| 4620 | Com family DNA-binding transcriptional | |||
| 18815 | 5-nucleotidase | |||
| 18820 | R | SenRM074ORF19845P (100% identity) | GAAC | Sen24590ORF18820P |
| 18825 | integrase arm-type DNA-binding domain-containing | |||
| 20920 | phage portal protein | |||
| 20925 | M | M.EcoS19141ORF25P (99% identity) | M.Sen24590ORF20925P | |
| 20930 | C | C.Ecostr10ORF20P (85% identity) | C.Sen24590ORF20925P | |
| 20935 | R | Ecostr10ORF20P (99% identity) | GRGCYC | Sen24590ORF20925P |
| 20940 | replication endonuclease | |||
| plasmid pCFSAN024590 | ||||
| 22920 | drug/metabolite exporter YedA | |||
| 22925 | V | V.StyUK1DcmP (100% identity) | V.Sen24590DcmP | |
| 22930 | M | M.Sen6803DcmP (100% identity) | CCWGG | M.Sen24590DcmP |
| 22935 | phosphohydrolase | |||
| 23125 | 71 aa hypothetical protein | |||
| 23130 | M | M.Sen12509ORF13395P (92% identity) | M.Sen24590ORF23130P | |
| 23135 | lysozyme | |||
| 23195 | 55 aa hypothetical protein | |||
| 23200 | M | M.Sen60086ORF9920P (94% identity) | M.Sen24590ORF23200P | |
| 23205 | 54 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 16290 | 33 aa hypothetical protein | |||
| 16295 | R | Sen12509ORF17930P (100% identity) | CAGAG | Sen24590ORF16300P |
| 16300 | M | M.SenC046ORF17340P (100% identity) | CAGAG | M.Sen24590ORF16300P |
| 16305 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12515 | isocitrate dehydrogenase | |||
| 12520 | R | SsoSE61ORF22640P (100% identity) | YCGR | Sen24590ORF12520P |
| 12525 | site-specific DNA recombinase | |||