Salmonella enterica subsp. enterica serovar Paratyphi B CFSAN000545 |
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Putative Salmonella enterica subsp. enterica serovar Paratyphi B CFSAN000545 RM systems
Ref: Hoffmann,M. et al. unpublished
REBASE ref # 32354
Complete sequence: 4,726,964 bp
GenBank #: CP074225
REBASE acronym: Sen2500
Org_num: 49046
All begin JYN57_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 19570 | restriction endonuclease | |||
| 19575 | R | SenB23ORFBP (100% identity) | CRTANNNNNNNNTCGC | Sen2500ORF19580P |
| 19580 | M | M.SenSPBI (100% identity) | CRTANNNNNNNNTCGC | M.Sen2500ORF19580P |
| 19585 | S | S.SenSPBI (100% identity) | CRTANNNNNNNNTCGC | S.Sen2500ORF19580P |
| 19590 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1760 | cell division protein DamX | |||
| 1765 | M | M.StyTDamP (100% identity) | GATC | M.Sen2500DamP |
| 1770 | ribulose-phosphate 3-epimerase | |||
| 2250 | DUF2556 family protein | |||
| 2255 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen2500ORF2255P |
| 2260 | DNA-binding transcriptional regulator Fis | |||
| 5475 | PerC family transcriptional regulator | |||
| 5480 | M | M.SenST224ORF7170P (100% identity) | M.Sen2500ORF5480P | |
| 5485 | RusA family crossover junction | |||
| 9050 | phosphohydrolase | |||
| 9055 | M | M.SspZ69DcmP (100% identity) | CCWGG | M.Sen2500DcmP |
| 9060 | V | V.StyUK1DcmP (100% identity) | V.Sen2500DcmP | |
| 9065 | drug/metabolite exporter YedA | |||
| 19200 | DUF4060 family protein | |||
| ??? | M | M.SspsA7ORF8410P (96% identity) | GATC | M.Sen2500ORF19205P |
| 19210 | YqaJ viral recombinase family protein | |||
| 19715 | DeoR family transcriptional regulator | |||
| 19720 | R | Sens661ORF19605P (100% identity) | Sen2500ORF19725P | |
| 19725 | M | M.Sens661ORF19605P (100% identity) | M.Sen2500ORF19725P | |
| 19730 | ATP-binding protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 16740 | 33 aa hypothetical protein | |||
| 16745 | R | Ssp15303ORFGP (99% identity) | CAGAG | Sen2500ORF16750P |
| 16750 | M | M.Ssp15303ORFGP (100% identity) | CAGAG | M.Sen2500ORF16750P |
| 16755 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19565 | BrnT family toxin | |||
| 19570 | R | SenSPBMrrP (100% identity) | Sen2500MrrP | |
| 19575 | type I restriction-modification system | |||