Salmonella enterica subsp. enterica serovar Newport CFSAN000598 |
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Putative Salmonella enterica subsp. enterica serovar Newport CFSAN000598 RM systems
Ref: Hoffmann,M. et al. unpublished
REBASE ref # 32354
Complete sequence: 4,900,793 bp
GenBank #: CP074217
REBASE acronym: Sen2494
Org_num: 49037
All begin JYN13_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4045 | transposase | |||
| 4050 | R | Sen33866ORF23510P (100% identity) | TGANNNNNNCTTC | Sen2494ORF4055P |
| 4055 | M | M.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | M.Sen2494ORF4055P |
| 4060 | S | S.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | S.Sen2494ORF4055P |
| 4065 | AAA family ATPase | |||
| 20370 | 322 aa hypothetical protein | |||
| 20375 | R | Spy5740IP (100% identity) | GACNNNNNNNRTCC | Sen2494ORF20380P |
| 20380 | M | M.SenS3ORF11567P (100% identity) | GACNNNNNNNRTCC | M.Sen2494ORF20380P |
| 20385 | S | S.SenS3ORF11567P (100% identity) | GACNNNNNNNRTCC | S.Sen2494ORF20380P |
| 20390 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1740 | cell division protein DamX | |||
| 1745 | M | M.StyTDamP (100% identity) | GATC | M.Sen2494DamP |
| 1750 | ribulose-phosphate 3-epimerase | |||
| 2230 | DUF2556 family protein | |||
| 2235 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen2494ORF2235P |
| 2240 | DNA-binding transcriptional regulator Fis | |||
| 3115 | DUF2732 family protein | |||
| 3120 | M | M.SensSZL38ORF19965P (100% identity) | M.Sen2494ORF3120P | |
| 3125 | replication endonuclease | |||
| 5900 | TraR/DksA family transcriptional regulator | |||
| 5905 | M | M.SspA39ORFGP (100% identity) | GATC | M.Sen2494ORF5905P |
| 5910 | replication endonuclease | |||
| 9675 | phosphohydrolase | |||
| 9680 | M | M.SenLiv11DcmP (100% identity) | CCWGG | M.Sen2494DcmP |
| 9685 | V | V.SenS50DcmP (100% identity) | V.Sen2494DcmP | |
| 9690 | drug/metabolite exporter YedA | |||
| 20510 | YebC/PmpR family DNA-binding transcriptional | |||
| 20515 | R | SenZYXORFBP (100% identity) | Sen2494ORF20515P | |
| 20520 | sce7725 family protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 18190 | 33 aa hypothetical protein | |||
| 18195 | R | Ssp6947IIP (100% identity) | CAGAG | Sen2494ORF18200P |
| 18200 | M | M.SenZYXORFDP (100% identity) | CAGAG | M.Sen2494ORF18200P |
| 18205 | MFS transporter | |||