Salmonella enterica subsp. enterica serovar Dublin CFSAN000517 |
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Putative Salmonella enterica subsp. enterica serovar Dublin CFSAN000517 RM systems
Ref: Hoffmann,M. et al. unpublished
REBASE ref # 32354
| Sequence length: | GenBank #: | |
| Chromosome: | 4,935,048 bp | CP074226 |
| plasmid pCFSAN000517_1: | 80,136 bp | CP074227 |
REBASE acronym: Sen2470
Org_num: 49006
All begin JYN04_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4200 | DUF91 domain-containing protein | |||
| 4205 | R | Ssp3CORF11555P (100% identity) | GGYANNNNNNTCG | Sen2470ORF4215P |
| 4210 | S | S1.Ssp3CORF11555P (100% identity) | GGYANNNNNNTCG | S.Sen2470ORF4215P |
| 4215 | M | M.StySBLI (100% identity) | GGYANNNNNNTCG | M.Sen2470ORF4215P |
| 4220 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1775 | cell division protein DamX | |||
| 1780 | M | M.StyTDamP (100% identity) | GATC | M.Sen2470DamP |
| 1785 | ribulose-phosphate 3-epimerase | |||
| 4080 | IS3 family transposase | |||
| 4085 | R | SspSAL045ORF19515P (100% identity) | Sen2470ORF4085P | |
| 4090 | YebC/PmpR family DNA-binding transcriptional | |||
| 9110 | 249 aa hypothetical protein | |||
| 9115 | M | M.Ssp3CORF22905P (100% identity) | M.Sen2470ORF9115P | |
| 9120 | ead/Ea22-like family protein | |||
| 9185 | PerC family transcriptional regulator | |||
| ??? | M | M.Sen59898ORF9120P (99% identity) | M.Sen2470ORF9190P | |
| 9195 | RusA family crossover junction | |||
| 14360 | drug/metabolite exporter YedA | |||
| 14365 | V | V.StyUK1DcmP (100% identity) | V.Sen2470DcmP | |
| 14370 | M | M.Ssp3CDcmP (100% identity) | CCWGG | M.Sen2470DcmP |
| 14375 | phosphohydrolase | |||
| 15155 | DUF550 domain-containing protein | |||
| 15160 | M | M.Ssp3CORF17125P (100% identity) | M.Sen2470ORF15160P | |
| 15165 | ead/Ea22-like family protein | |||
| 19080 | replication endonuclease | |||
| 19085 | M | M.Ssp8103ORF5415P (100% identity) | GATC | M.Sen2470ORF19085P |
| 19090 | TraR/DksA family transcriptional regulator | |||
| 22255 | DNA-binding transcriptional regulator Fis | |||
| 22260 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen2470ORF22260P |
| 22265 | DUF2556 family protein | |||
| plasmid pCFSAN000517_1 | ||||
| 24295 | 118 aa hypothetical protein | |||
| 24300 | M | M.StyUK1ORFAP (100% identity) | M.Sen2470ORF24300P | |
| 24305 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18155 | 33 aa hypothetical protein | |||
| 18160 | R | Ssp3CORF13760P (100% identity) | CAGAG | Sen2470ORF18165P |
| 18165 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen2470ORF18165P |
| 18170 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4215 | type I restriction-modification system subunit | |||
| 4220 | R | Ssp3CMrrP (100% identity) | Sen2470MrrP | |
| 4225 | N-6 DNA methylase | |||