Salmonella enterica subsp. enterica serovar Cubana CFSAN001083 |
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Putative Salmonella enterica subsp. enterica serovar Cubana CFSAN001083 RM systems
Ref: Hoffmann,M. et al. unpublished
REBASE ref # 32354
Complete sequence: 5,019,202 bp
GenBank #: CP074202
REBASE acronym: Sen1083
Org_num: 49001
All begin JYN27_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 20665 | toll/interleukin-1 receptor domain-containing | |||
| 20670 | M | M.Sen76814ORF1304P (100% identity) | RAACNNNNNTGA | M.Sen1083ORF20670P |
| 20675 | S | S.Sen76814ORF1304P (100% identity) | RAACNNNNNTGA | S.Sen1083ORF20670P |
| 20680 | R | Sen76814ORF1304P (100% identity) | RAACNNNNNTGA | Sen1083ORF20670P |
| 20685 | AAA family ATPase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 525 | acyl-CoA dehydrogenase | |||
| 530 | M | M1.Sen7349IV (86% identity) | M1.Sen1083ORF530P | |
| 535 | R | Sen7349IVP (92% identity) | Sen1083ORF530P | |
| 540 | M | M2.Ean95577ORF200P (76% identity) | M2.Sen1083ORF530P | |
| 545 | tyrosine-type recombinase/integrase | |||
| 1810 | cell division protein DamX | |||
| 1815 | M | M.StyTDamP (100% identity) | GATC | M.Sen1083DamP |
| 1820 | ribulose-phosphate 3-epimerase | |||
| 2300 | DUF2556 family protein | |||
| 2305 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen1083ORF2305P |
| 2310 | DNA-binding transcriptional regulator Fis | |||
| 9285 | DUF4917 family protein | |||
| 9290 | M | M.Sen71944ORF17860P (100% identity) | M.Sen1083ORF9290P | |
| 9295 | 852 aa hypothetical protein | |||
| 9470 | phosphohydrolase | |||
| 9475 | M | M.SenZ223DcmP (100% identity) | CCWGG | M.Sen1083DcmP |
| 9480 | V | V.StyUK1DcmP (100% identity) | V.Sen1083DcmP | |
| 9485 | drug/metabolite exporter YedA | |||
| 10005 | PerC family transcriptional regulator | |||
| 10010 | M | M.SenS095ORF13900P (100% identity) | M1.Sen1083ORF10010P | |
| 10015 | M | M.SenS095ORF13895P (100% identity) | M2.Sen1083ORF10010P | |
| 10020 | LexA family transcriptional regulator | |||
| 20560 | YebC/PmpR family DNA-binding transcriptional | |||
| 20565 | R | Sen71944ORF13575P (100% identity) | Sen1083ORF20565P | |
| 20570 | CcdB family protein | |||
| 20700 | nucleotidyltransferase | |||
| 20705 | R | Sen71944ORF13430P (100% identity) | GAAC | Sen1083ORF20705P |
| 20710 | integrase arm-type DNA-binding domain-containing | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 18135 | 33 aa hypothetical protein | |||
| 18140 | R | Sen71944ORF4490P (100% identity) | CAGAG | Sen1083ORF18145P |
| 18145 | M | M.Sen76814ORF1631P (100% identity) | CAGAG | M.Sen1083ORF18145P |
| 18150 | MFS transporter | |||