Salmonella enterica subsp. enterica serovar Typhimurium A_cip |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium A_cip RM systems
Ref: Kakatkar,A.S. et al. unpublished
REBASE ref # 32359
| Sequence length: | GenBank #: | |
| Chromosome: | 4,857,880 bp | CP074094 |
| plasmid pSLT: | 93,933 bp | CP074095 |
REBASE acronym: SenAcip
Org_num: 49075
All begin KFU99_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 23075 | endoribonuclease SymE | |||
| 23080 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.SenAcipORF23085P |
| 23085 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.SenAcipORF23085P |
| 23090 | R | StyLT2IIP (100% identity) | GAGNNNNNNRTAYG | SenAcipORF23085P |
| 23095 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10220 | drug/metabolite exporter YedA | |||
| 10225 | V | V.StyUK1DcmP (100% identity) | V.SenAcipDcmP | |
| 10230 | M | M.SspZ54DcmP (100% identity) | CCWGG | M.SenAcipDcmP |
| 10235 | phosphohydrolase | |||
| 17340 | DNA-binding transcriptional regulator Fis | |||
| 17345 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenAcipORF17345P |
| 17350 | DUF2556 family protein | |||
| 17835 | ribulose-phosphate 3-epimerase | |||
| 17840 | M | M.StyTDamP (100% identity) | GATC | M.SenAcipDamP |
| 17845 | cell division protein DamX | |||
| 22925 | AAA family ATPase | |||
| 22930 | RM | StyUK1IV (100% identity) | GATCAG | SenAcipORF22930P |
| 22935 | BREX system P-loop protein BrxC | |||
| plasmid pSLT | ||||
| 23765 | 118 aa hypothetical protein | |||
| 23770 | M | M.StyUK1ORFAP (100% identity) | M.SenAcipORF23770P | |
| 23775 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1810 | MFS transporter | |||
| 1815 | M | M.SenS0935ORF18065P (100% identity) | CAGAG | M.SenAcipORF1815P |
| 1820 | R | SspA292ORF17210P (100% identity) | CAGAG | SenAcipORF1815P |
| 1825 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 23090 | type I restriction-modification system | |||
| 23095 | R | StyUK1MrrP (100% identity) | SenAcipMrrP | |
| 23100 | BrnT family toxin | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14025 | replication endonuclease | |||
| 14030 | M | M.StyLTORF13745P (100% identity) | M.SenAcipORF14030P | |
| 14035 | TraR/DksA family transcriptional regulator | |||