Chloracidobacterium species E |
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Putative Chloracidobacterium species E RM systems
Ref: Saini,M.K. et al. unpublished
REBASE ref # 31909
| Sequence length: | GenBank #: | |
| chromosome 1: | 2,677,644 bp | CP072644 |
| chromosome 2: | 1,099,511 bp | CP072645 |
REBASE acronym: CspsB
Org_num: 47104
All begin J8C00_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 1390 | AI-2E family transporter | |||
| 1395 | M | M.CspSORF380P (100% identity) | M.CspsBORF1395P | |
| 1400 | V | V.CspsAORF10930P (100% identity) | V.CspsBORF1395P | |
| 1405 | 236 aa hypothetical protein | |||
| 2820 | aldo/keto reductase | |||
| 2825 | R | CspsAORF990P (100% identity) | CspsBORF2830P | |
| 2830 | M | M.CspsAORF990P (100% identity) | M.CspsBORF2830P | |
| 2835 | 71 aa hypothetical protein | |||
| 3020 | ABC transporter ATP-binding protein | |||
| 3025 | M | M.CspSORF2015P (100% identity) | M.CspsBORF3025P | |
| 3030 | ABC transporter ATP-binding protein | |||
| 3930 | 270 aa hypothetical protein | |||
| 3935 | M | M.CspsAORF2100P (100% identity) | M.CspsBORF3935P | |
| 3940 | DNA adenine methylase | |||
| 3935 | DNA adenine methylase | |||
| 3940 | M | M.CspsAORF2105P (100% identity) | M.CspsBORF3940P | |
| 3945 | CPBP family intramembrane metalloprotease | |||
| 4875 | protein kinase | |||
| 4880 | M | M.CspsAORF3075P (100% identity) | M.CspsBORF4880P | |
| 4885 | molybdopterin-dependent oxidoreductase | |||
| 5745 | 228 aa hypothetical protein | |||
| 5750 | M | M.CspsAORF3965P (100% identity) | M.CspsBORF5750P | |
| 5755 | 527 aa hypothetical protein | |||
| 5980 | LEA type 2 family protein | |||
| 5985 | R | CspsAORF4210P (100% identity) | CspsBORF5990P | |
| 5990 | M | M.CspsAORF4210P (100% identity) | M.CspsBORF5990P | |
| 5995 | D-tyrosyl-tRNA(Tyr) deacylase | |||
| 6915 | sensor histidine kinase | |||
| 6920 | R | CspsAORF5145P (98% identity) | CspsBORF6925P | |
| 6925 | M | M.CspsAORF5145P (93% identity) | M.CspsBORF6925P | |
| 6930 | DUF499 domain-containing protein | |||
| 9800 | (Fe-S)-binding protein | |||
| 9805 | M | M.CspsAORF8080P (100% identity) | M.CspsBORF9805P | |
| 9810 | 285 aa hypothetical protein | |||
| 9805 | site-specific DNA-methyltransferase | |||
| 9810 | R | CspsAORF8080P (100% identity) | CspsBORF9810P | |
| 9815 | C | C.CspsAORF8080P (100% identity) | C.CspsBORF9810P | |
| 9820 | LptF/LptG family permease | |||
| chromosome 2 | ||||
| 11810 | VOC family protein | |||
| 11815 | R | CspsAORF13945P (100% identity) | CspsBORF11820P | |
| 11820 | M | M.CspsAORF13945BP (100% identity) | M.CspsBORF11820BP | |
| 11825 | transposase | |||
| 11830 | M | M.CspsDORF14600AP (87% identity) | M.CspsBORF11820AP | |
| 11835 | transposase | |||
| 11840 | alpha-galactosidase | |||
| 11845 | M | M.CspsAORF13970P (100% identity) | M.CspsBORF11845P | |
| 11850 | R | CspsAORF13970P (100% identity) | CspsBORF11845P | |
| 11855 | NAD-dependent DNA ligase LigA | |||
| 12555 | 64 aa hypothetical protein | |||
| 12560 | M | M.CspsAORF14695P (88% identity) | M.CspsBORF12560P | |
| 12565 | SAM-dependent methyltransferase | |||
| 13140 | 151 aa hypothetical protein | |||
| 13145 | M | M.CspsAORF15285P (100% identity) | M.CspsBORF13145P | |
| 13150 | 253 aa hypothetical protein | |||
| 14015 | ABC transporter substrate-binding protein | |||
| 14020 | R | CspNORF12795P (100% identity) | CspsBORF14025P | |
| 14025 | M | M.CspNORF12795P (100% identity) | M.CspsBORF14025P | |
| 14035 | SpoIIE family protein phosphatase | |||
| 14265 | 375 aa hypothetical protein | |||
| 14270 | RM | CspsAORF12005P (100% identity) | CspsBORF14270P | |
| 14275 | 125 aa hypothetical protein | |||
| 14385 | amidohydrolase family protein | |||
| 14390 | M | M.CspsAORF12130P (100% identity) | M.CspsBORF14390P | |
| 14395 | metal-dependent hydrolase | |||
| 14770 | glycosyltransferase family 2 protein | |||
| 14775 | M | M.CspSORF12095P (100% identity) | M.CspsBORF14775P | |
| 14780 | R | CspSORF12095P (100% identity) | CspsBORF14775P | |
| 14785 | response regulator | |||
| 14785 | response regulator | |||
| 14790 | RM | CspSORF12080P (100% identity) | CspsBORF14790P | |
| 14795 | tRNA pseudouridine(38-40) synthase TruA | |||
| 15080 | SidA/IucD/PvdA family monooxygenase | |||
| 15085 | M | M.CspsAORF12815P (100% identity) | M.CspsBORF15085P | |
| 15090 | 259 aa hypothetical protein | |||
| 15350 | tetratricopeptide repeat protein | |||
| 15355 | M | M.CspsAORF13095P (100% identity) | M.CspsBORF15355P | |
| 15360 | ferritin-like domain-containing protein | |||
| 15765 | 92 aa hypothetical protein | |||
| 15770 | M | M.CspsAORF13510P (100% identity) | M.CspsBORF15770P | |
| 15775 | alpha-E domain-containing protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 2 | ||||
| 11470 | 166 aa hypothetical protein | |||
| 11475 | R | CspsBORF15835P (27% identity) | CspsBORF11490P | |
| 11480 | 95 aa hypothetical protein | |||
| 11485 | 210 aa hypothetical protein | |||
| ??? | M | M.CspsBORF15835P (58% identity) | M.CspsBORF11490P | |
| 14215 | DUF262 domain-containing protein | |||
| 14220 | R | CspSORF12640P (100% identity) | CspsBORF14225P | |
| 14225 | M | M.CspSORF12640P (100% identity) | M.CspsBORF14225P | |
| 14230 | DNA binding domain-containing protein | |||
| 15820 | DNA/RNA non-specific endonuclease | |||
| 15825 | R | CspS2ORF11865P (100% identity) | CspsBORF15835P | |
| 15830 | 212 aa hypothetical protein | |||
| 15835 | M | M.CspsAORF13575P (100% identity) | M.CspsBORF15835P | |
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 340 | 86 aa hypothetical protein | |||
| 345 | R | CspsAMrrP (100% identity) | CspsBMrrP | |
| 350 | DNA polymerase I | |||