Ref: Saini,M.K. et al. unpublished

REBASE ref # 31909

Sequence length:GenBank #:
chromosome 1: 2,641,344 bp CP072634
chromosome 2: 994,244 bp CP072635

REBASE acronym: CspsD

Org_num: 47141

 

All begin J8C01_

Type I
ORF Gene Most similar Specificity Name
 
chromosome 2
 
12410 113 aa hypothetical protein
??? M M.CspsAORF11980P (89% identity) M.CspsDORF12415P
12420 DNA binding domain-containing protein
12425 nucleotidyltransferase family protein
12430 DUF86 domain-containing protein
12435 S S1.CspsAORF11980P (68% identity) S1.CspsDORF12415P
12440 S S.AspKB6II (30% identity) S2.CspsDORF12415P
12445 R AbaRan1ORF392P (80% identity) CspsDORF12415P
12450 SAM-dependent DNA methyltransferase
 
12440 restriction endonuclease subunit S
12445 R CspsDORF12415P (100% identity) CspsDORF12450P
12450 M M.Btu2912ORF2965P (86% identity) M.CspsDORF12450P
12455 S S.Btu2912ORF2965P (35% identity) S.CspsDORF12450P
12460 294 aa hypothetical protein
Type II
ORF Gene Most similar Specificity Name
 
chromosome 1
 
195 HEAT repeat domain-containing protein
200 M M.CthEORF177P (99% identity) M.CspsDORF200P
205 R CthsBORF195P (100% identity) CspsDORF200P
210 (2Fe-2S)-binding protein
 
940 NgoFVII family restriction endonuclease
945 RM RspRSORF299P (84% identity) CspsDORF945P
950 transposase
 
2035 ABC transporter ATP-binding protein
2040 M M.CthBORF415P (97% identity) M.CspsDORF2040P
2045 ABC transporter ATP-binding protein
 
2920 270 aa hypothetical protein
2925 M M.CthsBORF3040P (97% identity) M.CspsDORF2925P
2930 DNA adenine methylase
 
2925 DNA adenine methylase
2930 M M.CspsBORF3940P (98% identity) M.CspsDORF2930P
2935 515 aa hypothetical protein
 
3650 transposase
3655 RM CthBORF745P (98% identity) CspsDORF3655P
3660 380 aa hypothetical protein
 
3665 ATP-binding protein
3670 M M.CthsBORF3810P (99% identity) M.CspsDORF3670P
3675 216 aa hypothetical protein
 
4700 228 aa hypothetical protein
4705 M M.CthsBORF4880P (100% identity) M.CspsDORF4705P
4710 527 aa hypothetical protein
 
5835 sensor histidine kinase
5840 R CthsBORF6085P (97% identity) CspsDORF5845P
5845 M M.Csp4045ORF5830P (87% identity) M.CspsDORF5845P
5850 DUF499 domain-containing protein
 
8715 4Fe-4S dicluster domain-containing protein
8720 M M.CspsBORF9805P (98% identity) M.CspsDORF8720P
??? R CspsBORF9810P (89% identity) CspsDORF8720P
8730 C C.OcyMTP1ORFDP (97% identity) C.CspsDORF8720P
8735 LptF/LptG family permease
 
9290 ABC transporter permease
9295 M M.CthsBORF9775P (95% identity) M.CspsDORF9295P
9300 R CthsBORF9775P (97% identity) CspsDORF9295P
9305 methylmalonyl-CoA epimerase
 
9540 nucleotidyltransferase domain-containing
9545 M M.CthsBORF10035P (79% identity) M.CspsDORF9545P
9550 nucleotidyltransferase domain-containing
9555 R CthsBORF10035P (97% identity) CspsDORF9545P
9560 DUF86 domain-containing protein
 
10170 M48 family metallopeptidase
10175 M M.Csp4045ORF10110P (99% identity) M.CspsDORF10175P
10180 R Csp4045ORF10110P (97% identity) CspsDORF10175P
10185 DUF433 domain-containing protein
 
11020 type II toxin-antitoxin system PemK/MazF family
11025 M M.CthsBORF11485P (99% identity) M.CspsDORF11025P
11030 pseudogene
 
chromosome 2
 
12315 metal-dependent hydrolase
12320 M M.OcyMTP1ORFTP (86% identity) M.CspsDORF12320P
12325 amidohydrolase family protein
 
12380 HEAT repeat domain-containing protein
12385 M M.CthsBORF14505P (99% identity) M.CspsDORF12385P
12390 nucleotidyltransferase domain-containing
 
12610 APC family permease
12620 M M.CthsBORF14155P (98% identity) M.CspsDORF12620P
12625 R CthsBORF14155P (97% identity) CspsDORF12620P
12630 ABC transporter substrate-binding protein
 
13240 ABC transporter permease subunit
13245 M M.CthsBORF13535P (98% identity) M.CspsDORF13245P
13250 transposase
 
13460 253 aa hypothetical protein
13465 M M.CspsBORF13145P (33% identity) M.CspsDORF13465AP
13470 transposase
13475 M M.CspsBORF13145P (45% identity) M.CspsDORF13465BP
13480 transposase
 
13835 helicase
13840 M M.CthsBORF12925P (98% identity) M.CspsDORF13840P
13845 PIN domain-containing protein
 
14565 NAD-dependent DNA ligase LigA
14570 M M.CthsBORF11985P (97% identity) M.CspsDORF14570P
??? R Csp4045ORF12960P (77% identity) CspsDORF14570P
14585 site-specific DNA-methyltransferase
 
14580 192 aa hypothetical protein
??? M M.CspsBORF11845P (80% identity) M.CspsDORF14585P
14590 Ig domain-containing protein
 
14595 transposase
14600 M M.CspNORF14930P (63% identity) M.CspsDORF14600AP
14605 transposase
14610 M M.CspsBORF11820BP (98% identity) M.CspsDORF14600BP
14615 R CthsBORF11955P (97% identity) CspsDORF14600P
14620 NAD+ synthase
 
14905 tetratricopeptide repeat protein
14910 M M.CspsBORF15355P (98% identity) M.CspsDORF14910P
14915 ferritin-like domain-containing protein
Type III
ORF Gene Most similar Specificity Name
 
chromosome 2
 
11375 DNA/RNA non-specific endonuclease
11380 R UbaMSORFD24P (31% identity) CspsDORF11385P
11385 M M.OcyMTP1ORFNP (52% identity) M.CspsDORF11385P
 
12825 50S ribosomal protein L28
12830 R CspsAORF16020P (96% identity) CspsDORF12840P
12835 nucleotidyltransferase domain-containing
12840 M M.CspsAORF16020P (85% identity) M.CspsDORF12840P
12845 type III restriction endonuclease subunit R
 
13375 alpha/beta fold hydrolase
13380 M M.HthTH1ORF516P (52% identity) M.CspsDORF13380P
13385 R Rsp941ORF2295P (67% identity) CspsDORF13380P
13390 322 aa hypothetical protein
Type IV
ORF Gene Most similar Specificity Name
 
chromosome 1
 
10560 86 aa hypothetical protein
10565 R CthsBMrrP (97% identity) CspsDMrrP
10570 DNA polymerase I