Phocaeicola dorei CL06T03C03 |
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Putative Phocaeicola dorei CL06T03C03 RM systems
Ref: Garcia-Bayona,L. et al. PLoS Genet 17 (4), e1009541 (2021)
REBASE ref # 31897
Complete sequence: 5,662,170 bp
GenBank #: CP072246
REBASE acronym: Pdo3C03
Org_num: 48625
All begin INE79_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2033 | 98 aa hypothetical protein | |||
| 2034 | S | S4.Pdo3716YORF13100P (100% identity) | S3.Pdo3C03ORF2038P | |
| 2035 | Phage integrase family protein | |||
| 2036 | S | S2.Pvu3C24ORF1046P (98% identity) | CYYANNNNNNNCTTG | S2.Pdo3C03ORF2038P |
| 2037 | S | S1.Pdo1ORF14765P (99% identity) | S1.Pdo3C03ORF2038P | |
| 2038 | M | M.Pdo2ORF18935P (100% identity) | M.Pdo3C03ORF2038P | |
| 2039 | R | Pdo2ORF18935P (98% identity) | Pdo3C03ORF2038P | |
| 2040 | C | C.Pvu201ORF22395P (100% identity) | C.Pdo3C03ORF2038P | |
| 2041 | protein of unknown function (DUF4357) | |||
| 2457 | S-adenosylmethionine:tRNA | |||
| 2458 | M | M.Bdo12C01ORF3417P (99% identity) | M.Pdo3C03ORF2458P | |
| 2459 | S | S1.Pdo1051II (99% identity) | CAAYNNNNNNCTG | S1.Pdo3C03ORF2458P |
| 2460 | S | S2.PmeBin22ORFCP (100% identity) | S2.Pdo3C03ORF2458P | |
| 2461 | Type I restriction enzyme R protein | |||
| 2510 | 80 aa hypothetical protein | |||
| 2511 | R | Pdo3716YORF6360P (94% identity) | Pdo3C03ORF2511P | |
| 2512 | WYL domain protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 14 | 99 aa hypothetical protein | |||
| 15 | RM | Bin174ORF12665P (71% identity) | Pdo3C03ORF15BP | |
| 16 | IS1380 family transposase IS612B | |||
| 17 | RM | PdiR46ORF14225P (29% identity) | Pdo3C03ORF15AP | |
| 18 | Helicase conserved C-terminal domain protein | |||
| 294 | 241 aa hypothetical protein | |||
| 295 | M | M.PvuC06ORF1788P (100% identity) | M.Pdo3C03ORF295P | |
| 296 | protein of unknown function (DUF5045) | |||
| 693 | 105 aa hypothetical protein | |||
| 694 | M | M.Bdo12C01ORF412P (97% identity) | M.Pdo3C03ORF694P | |
| 695 | PcfJ-like protein | |||
| 1411 | Restriction endonuclease | |||
| 1412 | C | C.Pdo2ORF16265P (100% identity) | C.Pdo3C03ORF1413P | |
| 1413 | M | M.Bdo12C01ORF3632P (100% identity) | M.Pdo3C03ORF1413P | |
| 1414 | 68 aa hypothetical protein | |||
| 1415 | IS1380 family transposase IS612B | |||
| 1416 | S | S.Pdo2ORF16265P (79% identity) | S.Pdo3C03ORF1413P | |
| 1417 | Protein kinase domain protein | |||
| 1623 | Thymidylate synthase ThyA | |||
| 1624 | M | M.PspAD58ORF14130P (100% identity) | M.Pdo3C03ORF1624P | |
| 1625 | 146 aa hypothetical protein | |||
| 1645 | 146 aa hypothetical protein | |||
| 1646 | R | Bce2022ORF12350P (97% identity) | Pdo3C03ORF1647P | |
| 1647 | M | M.Pgu1355ORF8740P (96% identity) | M.Pdo3C03ORF1647P | |
| 1648 | C | C.Pgu1355ORF8740P (94% identity) | C.Pdo3C03ORF1647P | |
| 1649 | CrcB-like protein, Camphor Resistance (CrcB) | |||
| 1867 | Neopullulanase 2 | |||
| 1868 | R | Pdo3716YORF10665P (100% identity) | Pdo3C03ORF1868P | |
| 1869 | Choloylglycine hydrolase | |||
| 2490 | Thymidylate synthase ThyA | |||
| 2491 | M | M.PmeBin1ORFBP (100% identity) | M.Pdo3C03ORF2491P | |
| 2492 | 144 aa hypothetical protein | |||
| 2818 | 1392 aa hypothetical protein | |||
| 2819 | R | Hgu7ORFHP (99% identity) | Pdo3C03ORF2820P | |
| 2820 | M | M.Hgu7ORFHP (100% identity) | M.Pdo3C03ORF2820P | |
| 2821 | 154 aa hypothetical protein | |||
| 2831 | 136 aa hypothetical protein | |||
| 2832 | M | M.Bsp4347ORF4211P (100% identity) | M.Pdo3C03ORF2832P | |
| 2833 | Thymidylate synthase ThyA | |||
| 3192 | 78 aa hypothetical protein | |||
| ??? | M | M.Hgu7ORFWP (99% identity) | M.Pdo3C03ORF3193P | |
| 3195 | protein of unknown function (DUF3846) | |||
| 4276 | 462 aa hypothetical protein | |||
| 4277 | M | M.Pvu626ORF9540P (100% identity) | M.Pdo3C03ORF4277P | |
| 4278 | AAA ATPase domain protein | |||