Parabacteroides distasonis APCS2/PD |
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Putative Parabacteroides distasonis APCS2/PD RM systems
Ref: Guerin,E. et al. unpublished
REBASE ref # 32200
Complete sequence: 5,344,828 bp
GenBank #: CP042285
REBASE acronym: PdiS2PD
Org_num: 48572
All begin FQN59_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3245 | restriction endonuclease subunit S | |||
| 3250 | S | S3.Pdi157ORF17690P (97% identity) | S3.PdiS2PDORF3300P | |
| 3255 | transposase | |||
| 3260 | 455 aa hypothetical protein | |||
| 3265 | IS1380 family transposase | |||
| 3270 | tyrosine-type recombinase/integrase | |||
| 3275 | S | S2.PdiC09ORF3301P (99% identity) | S2.PdiS2PDORF3300P | |
| 3280 | S | S1.PdiC09ORF3301P (100% identity) | S1.PdiS2PDORF3300P | |
| 3285 | 143 aa hypothetical protein | |||
| 3290 | 141 aa hypothetical protein | |||
| 3295 | virulence RhuM family protein | |||
| 3300 | M | M.PdiC09ORF3301P (100% identity) | M.PdiS2PDORF3300P | |
| 3305 | R | PdiC09ORF3301P (100% identity) | PdiS2PDORF3300P | |
| 3310 | C | C.PdiC09ORF3301P (100% identity) | C.PdiS2PDORF3300P | |
| 3315 | GIY-YIG nuclease family protein | |||
| 3390 | 146 aa hypothetical protein | |||
| 3395 | R | PdiPdIIIP (100% identity) | PdiS2PDORF3410P | |
| 3400 | S | S.PdiGP102ORF12805P (62% identity) | S.PdiS2PDORF3410P | |
| 3405 | AAA family ATPase | |||
| 3410 | M | M.PdiGP102ORF12805P (100% identity) | M.PdiS2PDORF3410P | |
| 3415 | GIY-YIG nuclease family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6375 | 1244 aa hypothetical protein | |||
| 6380 | M | M.Pdi615ORF5990P (100% identity) | CCWGG | M.PdiS2PDORF6380P |
| 6385 | helix-turn-helix domain-containing protein | |||
| 6390 | R | PspCT06IIP (100% identity) | CCWGG | PdiS2PDORF6380P |
| 6395 | glycoside hydrolase xylanase | |||
| 7995 | fructose-6-phosphate aldolase | |||
| 8000 | M | M.PspAT13ORF7715P (99% identity) | CGCG | M.PdiS2PDORF8000P |
| 8005 | 208 aa hypothetical protein | |||
| 9850 | restriction endonuclease | |||
| 9855 | V | V.PdiF128ORF22190P (61% identity) | V.PdiS2PDORF9860P | |
| 9860 | M | M.Ain12060ORF4190P (68% identity) | M.PdiS2PDORF9860P | |
| 9865 | R | PmeBin513ORFBP (55% identity) | PdiS2PDORF9860P | |
| 9870 | 61 aa hypothetical protein | |||
| 16395 | conjugal transfer protein | |||
| 16400 | M | M.Bth8702ORF19140P (100% identity) | M.PdiS2PDORF16400P | |
| 16405 | DUF3872 domain-containing protein | |||
| 19620 | ThuA domain-containing protein | |||
| 19625 | RM | PdiF128ORF7450P (94% identity) | PdiS2PDORF19625P | |
| 19630 | beta-glycosidase | |||
| 20505 | toprim domain-containing protein | |||
| ??? | M | M.Bre10512ORF55P (80% identity) | M.PdiS2PDORF20510P | |
| 20520 | mobilization protein | |||
| 20760 | toxin Bro | |||
| 20765 | M | M.Bxy3ORF24685P (82% identity) | M.PdiS2PDORF20765P | |
| 20770 | 115 aa hypothetical protein | |||
| 20790 | transcriptional regulator | |||
| 20795 | RM | Bfr300ORF6360P (99% identity) | PdiS2PDORF20800P | |
| 20800 | M | M.Bno12C05ORF2202P (99% identity) | M.PdiS2PDORF20800P | |
| 20805 | AAA family ATPase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 11100 | 244 aa hypothetical protein | |||
| 11105 | M | M.Pdi8503ORF2980P (78% identity) | M.PdiS2PDORF11105P | |
| 11110 | R | Pdi574ORF2455P (99% identity) | PdiS2PDORF11105P | |
| 11115 | 100 aa hypothetical protein | |||